RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Nid2O88322 1403 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 9230110C19RikQ8CC70 267 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 Nup88Q8CEC0 753 aaKnown RBP12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 MypopQ8R4U1 393 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 NpeppsQ11011 920 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 Hdgfl1Q2VPR5 283 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 Ifit1Q64282 463 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 Triml1Q8BVP1 470 aa12.59□□□□□ -0.39
Msh3-202ENSMUST00000185852 Metap2O08663 478 aaKnown RBP12.58□□□□□ -0.39
Msh3-202ENSMUST00000185852 Gm21985Q6P6P5 1106 aa12.58□□□□□ -0.39
Msh3-202ENSMUST00000185852 Vps16Q920Q4 839 aa12.58□□□□□ -0.39
Msh3-202ENSMUST00000185852 Iqca1Q9CUL5 857 aa12.58□□□□□ -0.39
Msh3-202ENSMUST00000185852 Ripk4Q9ERK0 786 aa12.58□□□□□ -0.39
Msh3-202ENSMUST00000185852 Prl3d2F6R3P9 224 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Limch1Q3UH68 1057 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ints5Q8CHT3 1018 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Bach1P97302 739 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Erich4Q3UNU4 136 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Map3k12Q60700 888 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 CtcfQ61164 736 aaKnown RBP12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Pim2Q62070 370 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 TrhQ62361 256 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Nek11Q8C0Q4 628 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 2310002L09RikQ9D7L5 217 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Cyp27a1Q9DBG1 533 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Dip2bQ3UH60 1574 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Gemin5Q8BX17 1502 aaKnown RBP12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Col15a1O35206 1367 aa12.58□□□□□ -0.4
Msh3-202ENSMUST00000185852 Dennd3A2RT67 1274 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Hap1O35668 628 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 InsrrQ9WTL4 1300 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Zbtb7aO88939 569 aaKnown RBP12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Syt1P46096 421 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Tlr8P58682 1032 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ipo4Q8VI75 1082 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Trip6Q9Z1Y4 480 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Arhgef28P97433 1693 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Usp5P56399 858 aaKnown RBP12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 HellsQ60848 821 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Arid3aQ62431 601 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Trim56Q80VI1 734 aaKnown RBP12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Zcrb1Q9CZ96 217 aaKnown RBP12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Akt1s1Q9D1F4 257 aa12.57□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ugt1a5B2RT14 529 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Rps8P62242 208 aaKnown RBP12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Tmem119Q8R138 280 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Cdc45Q9Z1X9 566 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Eif2ak4Q9QZ05 1648 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Spg7Q3ULF4 781 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Susd4Q8BH32 490 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Glipr1l2Q9CQ35 332 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Slc1a4O35874 532 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Cyp24a1Q64441 514 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 March6Q6ZQ89 909 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ltb4r2Q9JJL9 360 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Gdf11Q9Z1W4 405 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Tekt3Q6X6Z7 490 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Q8C6G1 249 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Rdm1Q9CQK3 281 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 Efcc1Q9JJF6 558 aa12.56□□□□□ -0.4
Msh3-202ENSMUST00000185852 CemipQ8BI06 1361 aa12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 Aox2Q5SGK3 1345 aa12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 Arid4aF8VPQ2 1261 aaKnown RBP12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 Acnat2Q8BGG9 420 aa12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 Taf5lQ91WQ5 589 aa12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 WtapQ9ER69 396 aa12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 Celf1P28659 486 aaKnown RBP12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 Eif5P59325 429 aaKnown RBP12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 MycbpapQ5SUV2 932 aa12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 ParnQ8VDG3 624 aa12.55□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ano1Q8BHY3 960 aa12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 Amigo3Q8C2S7 508 aa12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 Emilin1Q99K41 1017 aa12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 Sh3tc1G3X9F6 1346 aa12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 Rad50P70388 1312 aa12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 MypnQ5DTJ9 1315 aa12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 Gm29094F6Q785 221 aa12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 Prkg1P0C605 671 aa12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ripor2Q80U16 1078 aa12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 Smc2Q8CG48 1191 aaKnown RBP12.54□□□□□ -0.4
Msh3-202ENSMUST00000185852 Rreb1Q3UH06 1700 aaKnown RBP12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Gm30191A0A0U1RNT7 187 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 LyarQ08288 388 aaKnown RBP12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Frmd3Q8BHD4 595 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Adam1bQ8R534 806 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ccdc43Q9CR29 222 aaKnown RBP12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Gtf2iQ9ESZ8 998 aaKnown RBP12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Zscan29E9Q5B4 869 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Kiaa0754Q69ZZ9 979 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Hps4Q99KG7 671 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ttc5Q99LG4 440 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Gm13023A2A8N2 498 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Cspp1B2RX88 1205 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Mxd3Q80US8 206 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Clca2Q8BG22 942 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Mrps27Q8BK72 415 aaKnown RBP12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Cep89Q9CZX2 791 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Igsf1Q7TQA1 1317 aa12.53□□□□□ -0.4
Msh3-202ENSMUST00000185852 Ces1aE9PYP1 563 aa12.52□□□□□ -0.4
Msh3-202ENSMUST00000185852 Sema6bO54951 886 aa12.52□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms