RNA–Protein interactions for RNA: ENSMUST00000176769.8

Smarca2-216, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 5,703 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-216ENSMUST00000176769 NogP97466 232 aa13.48□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Srek1Q8BZX4 494 aaKnown RBP13.48□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Camta1A2A891 1682 aa13.48□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Gtf3c5Q8R2T8 520 aa13.48□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Zfp142G5E869 1843 aa13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Mmp14P53690 582 aa13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Ireb2Q811J3 963 aaKnown RBP13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 CarsQ9ER72 831 aaKnown RBP13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Sel1lQ9Z2G6 790 aa13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Llgl2Q3TJ91 1027 aa13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Ccdc39Q9D5Y1 937 aa13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Tpx2A2APB8 745 aaKnown RBP13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Ltv1Q6NSQ7 470 aaKnown RBP13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Olfm5Q8BU90 496 aa13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 KinQ8K339 391 aa13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Mon2Q80TL7 1715 aa13.47□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Telo2Q9DC40 840 aaKnown RBP13.46□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Cfap99A0A140LIX9 648 aa13.46□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Slc10a4Q3UEZ8 437 aa13.46□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Slfn1Q9Z0I7 337 aa13.46□□□□□ -0.25
Smarca2-216ENSMUST00000176769 Tmed8Q3UHI4 326 aa13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Dpf2Q61103 391 aaKnown RBP13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 GorabQ8BRM2 368 aa13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Golim4Q8BXA1 655 aa13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 SowahdQ8BY98 327 aa13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Trim29Q8R2Q0 587 aa13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 TsksO54887 585 aa13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 LdhdQ7TNG8 484 aa13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Sulf1Q8K007 870 aa13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Kri1Q8VDQ9 704 aaKnown RBP13.46□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ftl2P49945 183 aa13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Nedd4P46935 887 aaKnown RBP13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Nup153E9Q3G8 1462 aaKnown RBP13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Btn2a2A4QPC6 514 aa13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ifi207E9Q3L4 978 aa13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Irx3P81067 507 aa13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Brf1Q8CFK2 676 aa13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Stag1Q9D3E6 1258 aa13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ier5O89113 308 aa13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Znf710Q3U288 666 aa13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Unc5clQ6R653 518 aa13.45□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Psd3Q2PFD7 1037 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Rab3gap1Q80UJ7 981 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Tfip11Q9ERA6 838 aaKnown RBP13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Kbtbd13Q8C828 458 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Cul5Q9D5V5 780 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Npy5rO70342 466 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Rps12P63323 132 aaKnown RBP13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Lamc2Q61092 1191 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Abtb2Q7TQI7 1024 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Vmn1r199Q8R280 367 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Spata21Q8BHW6 681 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 McamQ8R2Y2 648 aaKnown RBP13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Myl6bQ8CI43 207 aa13.44□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Top1mtQ8R4U6 593 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 MsraQ9D6Y7 233 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Prss51A0A286YDY8 319 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Chl1P70232 1209 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Traf3ip1Q149C2 625 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Phf23Q8BSN5 401 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Fsd2Q8BZ52 692 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ivns1abpQ920Q8 642 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Nphp3Q7TNH6 1325 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Cdan1Q8CC12 1239 aa13.43□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Trip6Q9Z1Y4 480 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Clca2Q8BG22 942 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Slc1a4O35874 532 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Nlrp1aQ2LKU9 1182 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ciao1Q99KN2 339 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Nf2P46662 596 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Usp33Q8R5K2 909 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Bcl9lQ67FY2 1494 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Kiaa1107Q80TK0 1369 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Cplx1P63040 134 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 AsnsQ61024 561 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Tbc1d8Q9Z1A9 1134 aa13.42□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Slc4a4O88343 1079 aa13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ripor2Q80U16 1078 aa13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ift57Q8BXG3 429 aa13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Mcmdc2E9Q956 681 aa13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Gm4340L7N2C4 268 aa13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Spty2d1Q68FG3 682 aa13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Mapkapk5O54992 473 aa13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Pram1Q6BCL1 675 aa13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Krt82Q99M74 516 aa13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Prkrip1Q9CWV6 186 aaKnown RBP13.41□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ttll7A4Q9F0 912 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Bend3Q6PAL0 825 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ipo8Q7TMY7 1010 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Pnpla7A2AJ88 1352 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Yy1Q00899 414 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Rad50P70388 1312 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Cdkl5Q3UTQ8 938 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 1810065E05RikQ5NC41 235 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Dennd3A2RT67 1274 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Prl3d1P18121 224 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Gm2163Q6PCY5 473 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Robo1O89026 1612 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Thsd7aQ69ZU6 1645 aa13.4□□□□□ -0.26
Smarca2-216ENSMUST00000176769 Ubn2Q80WC1 1314 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms