RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Dhx38Q80X98 1228 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Plekhg6Q8R0J1 787 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 ParvgQ9ERD8 331 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 EvplQ9D952 2035 aa17.08■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Cfap44E9Q5M6 1843 aa17.07■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Mmp8O70138 465 aa17.07■□□□□ 0.32
Ercc1-203ENSMUST00000160369 XpcP51612 930 aa17.07■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Plekhf1Q3TB82 279 aa17.07■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Pdzrn3Q69ZS0 1063 aa17.07■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Zbtb3Q91X45 518 aa17.07■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Abcc4E9Q236 1325 aa17.06■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Glt1d1A4FUP9 346 aa17.06■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Dis3l2Q8CI75 870 aaKnown RBP17.06■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Osbpl5Q9ER64 874 aa17.06■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Mcmdc2E9Q956 681 aa17.05■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Atp2b3Q0VF55 1220 aa17.05■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Psmd1Q3TXS7 953 aa17.05■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Mctp2Q5RJH2 878 aa17.05■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Tnnt3Q9QZ47 272 aa17.05■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Nrxn2E9Q7X7 1710 aa17.04■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Eif6O55135 245 aa17.04■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Casp1P29452 402 aa17.04■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Neurod6P48986 337 aa17.04■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Csrnp1P59054 583 aa17.04■□□□□ 0.32
Ercc1-203ENSMUST00000160369 NfkbibQ60778 359 aa17.04■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Znfx1Q8R151 1909 aaKnown RBP17.04■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Gm4340L7N2C4 268 aa17.03■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Lrch1P62046 709 aa17.03■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Usp48Q3V0C5 1052 aa17.03■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Glrx3Q9CQM9 337 aa17.03■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Sytl4Q9R0Q1 673 aa17.03■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Ets1P27577 440 aa17.02■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Map9Q3TRR0 646 aa17.02■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Ift57Q8BXG3 429 aa17.02■□□□□ 0.32
Ercc1-203ENSMUST00000160369 Scn11aQ9R053 1765 aa17.02■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Golgb1E9PVZ8 3238 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Col1a1P11087 1453 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Ccdc51Q3URS9 406 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Trim27Q62158 513 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 CbarpQ66L44 698 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Ccdc93Q7TQK5 629 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Fam102bQ8BQS4 339 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Skor1Q8BX46 964 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Znf428Q8C1M2 176 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Sh3bp5lQ99LH9 392 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Tbc1d8Q9Z1A9 1134 aa17.01■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Sept1P42209 366 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Rhbdl3P58873 404 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Terf1P70371 421 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Gtpbp6Q3U6U5 514 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Spg7Q3ULF4 781 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Tom1l2Q5SRX1 507 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Glis3Q6XP49 780 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Ufl1Q8CCJ3 793 aaKnown RBP17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Ly6iQ9WU67 134 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Irs4Q9Z0Y7 1216 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Scn9aQ62205 1984 aa17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Nup98Q6PFD9 1816 aaKnown RBP17■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Nphp3Q7TNH6 1325 aa16.99■□□□□ 0.31
Ercc1-203ENSMUST00000160369 TsksO54887 585 aa16.99■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Fchsd1Q6PFY1 688 aa16.99■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Znf18Q810A1 556 aa16.99■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Rasgrp4Q8BTM9 673 aa16.99■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Tor1aip2Q8BYU6 502 aa16.99■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Cluap1Q8R3P7 413 aa16.99■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Kcnq5Q9JK45 933 aa16.99■□□□□ 0.31
Ercc1-203ENSMUST00000160369 A0A1W2P7S8 802 aa16.98■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Izumo3A6PWV3 263 aa16.98■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Usp17lbE9Q9U0 468 aa16.98■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Timm10P62073 90 aa16.98■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Cdc5lQ6A068 802 aaKnown RBP16.98■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Tmem266Q8BZB3 538 aa16.98■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Edc3Q8K2D3 508 aaKnown RBP16.98■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Polr3dQ91WD1 398 aa16.98■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Mex3cQ05A36 652 aaKnown RBP16.97■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Gm5592Q3V0A6 857 aa16.97■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Nell2Q61220 819 aa16.97■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Ddx31Q6NZQ2 687 aaKnown RBP16.97■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Riok1Q922Q2 567 aa16.97■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Trmt44Q9D2Q2 713 aa16.97■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Dpp7Q9ET22 506 aa16.97■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Mtmr2Q9Z2D1 643 aa16.97■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Hoxa7P02830 229 aa16.96■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Hs1bp3Q3TC93 395 aa16.96■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Wwc1Q5SXA9 1104 aa16.96■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Bag3Q9JLV1 577 aaKnown RBP16.96■□□□□ 0.31
Ercc1-203ENSMUST00000160369 Setdb1O88974 1307 aa16.96■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Mast3Q3U214 1321 aa16.96■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Kifc2O08672 792 aa16.95■□□□□ 0.3
Ercc1-203ENSMUST00000160369 AaasP58742 546 aa16.95■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Asap2Q7SIG6 958 aa16.95■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Abtb2Q7TQI7 1024 aa16.95■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Sptlc3Q8BG54 563 aa16.95■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Sf3a1Q8K4Z5 791 aaKnown RBP16.95■□□□□ 0.3
Ercc1-203ENSMUST00000160369 HdlbpQ8VDJ3 1268 aaKnown RBP16.95■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Tnip1Q9WUU8 647 aa16.95■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Ankrd63A2ARS0 390 aa16.94■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Prl7d1P04769 244 aa16.94■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Rps12P63323 132 aaKnown RBP16.94■□□□□ 0.3
Ercc1-203ENSMUST00000160369 Gm2163Q6PCY5 473 aa16.94■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms