RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Col4a3bpQ9EQG9 624 aa17.13■□□□□ 0.33
Vcan-205ENSMUST00000159337 Usp44Q8C2S0 711 aa17.13■□□□□ 0.33
Vcan-205ENSMUST00000159337 Topaz1E5FYH1 1653 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Wdr17E9Q271 1322 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Nlrp9bQ66X22 1003 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Rbbp8nlA2ABX0 614 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Ccdc121E9Q6D3 323 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Serpinb6bO08804 377 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Bcl2l13P59017 434 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Irx2P81066 474 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Atp1a3Q6PIC6 1013 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Lrrfip2Q91WK0 415 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Pcdhgc5Q91XW9 944 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Shank2Q80Z38 1476 aa17.12■□□□□ 0.33
Vcan-205ENSMUST00000159337 Tmem2Q5FWI3 1383 aa17.11■□□□□ 0.33
Vcan-205ENSMUST00000159337 Gtpbp6Q3U6U5 514 aa17.11■□□□□ 0.33
Vcan-205ENSMUST00000159337 Kmt5bQ3U8K7 883 aa17.11■□□□□ 0.33
Vcan-205ENSMUST00000159337 TrhQ62361 256 aa17.11■□□□□ 0.33
Vcan-205ENSMUST00000159337 DbnlQ62418 436 aa17.11■□□□□ 0.33
Vcan-205ENSMUST00000159337 Spag5Q7TME2 1165 aa17.11■□□□□ 0.33
Vcan-205ENSMUST00000159337 Lmbr1lQ9D1E5 489 aa17.11■□□□□ 0.33
Vcan-205ENSMUST00000159337 Slit1Q80TR4 1531 aa17.11■□□□□ 0.33
Vcan-205ENSMUST00000159337 Jakmip2D3YXK0 820 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 Rgs9O54828 675 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 SympkQ80X82 1284 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 Ppm1mQ8BU27 406 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 BrapQ99MP8 591 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 Xpo4Q9ESJ0 1151 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 Gm10563F6WIE4 79 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 L1td1Q587J6 782 aaKnown RBP17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 Kiaa1524Q8BWY9 907 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 Ptcd1Q8C2E4 695 aaKnown RBP17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 Naa16Q9DBB4 864 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 Pde3aQ9Z0X4 1141 aa17.1■□□□□ 0.33
Vcan-205ENSMUST00000159337 FosbP13346 338 aa17.09■□□□□ 0.33
Vcan-205ENSMUST00000159337 RbsnQ80Y56 783 aa17.09■□□□□ 0.33
Vcan-205ENSMUST00000159337 CrebrfQ8CDG5 640 aaKnown RBP17.09■□□□□ 0.33
Vcan-205ENSMUST00000159337 Ccdc158Q8CDI6 1109 aa17.09■□□□□ 0.33
Vcan-205ENSMUST00000159337 Telo2Q9DC40 840 aaKnown RBP17.09■□□□□ 0.33
Vcan-205ENSMUST00000159337 Samsn1P57725 372 aa17.09■□□□□ 0.33
Vcan-205ENSMUST00000159337 Dnm3Q8BZ98 863 aa17.09■□□□□ 0.33
Vcan-205ENSMUST00000159337 Tubb4aQ9D6F9 444 aa17.09■□□□□ 0.33
Vcan-205ENSMUST00000159337 Map7d2A2AG50 781 aa17.08■□□□□ 0.33
Vcan-205ENSMUST00000159337 Slc35g1Q8BY79 368 aa17.08■□□□□ 0.33
Vcan-205ENSMUST00000159337 Mb21d2Q8C525 428 aa17.08■□□□□ 0.33
Vcan-205ENSMUST00000159337 Hnrnpul1Q8VDM6 859 aaKnown RBP17.08■□□□□ 0.33
Vcan-205ENSMUST00000159337 Gli3Q61602 1583 aa17.08■□□□□ 0.32
Vcan-205ENSMUST00000159337 Itga6Q61739 1091 aa17.08■□□□□ 0.32
Vcan-205ENSMUST00000159337 Nxf7Q80SZ6 620 aaKnown RBP17.08■□□□□ 0.32
Vcan-205ENSMUST00000159337 Ppp1r18Q8BQ30 594 aa17.08■□□□□ 0.32
Vcan-205ENSMUST00000159337 Frat2Q8K025 231 aa17.08■□□□□ 0.32
Vcan-205ENSMUST00000159337 Tulp1Q9Z273 543 aa17.08■□□□□ 0.32
Vcan-205ENSMUST00000159337 Dhx8A2A4P0 1244 aaKnown RBP17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Capn2O08529 700 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Prl7a2O54831 253 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Sox30Q8CGW4 782 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Luzp1Q8R4U7 1068 aaKnown RBP17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Mei1Q9D4I2 1268 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Taf7Q9R1C0 341 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Gm11983V9GXS8 105 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Ktn1Q61595 1327 aaKnown RBP17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 InsrrQ9WTL4 1300 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Exosc10P56960 887 aaKnown RBP17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Cdc37Q61081 379 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Gm21985Q6P6P5 1106 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Ppp1r37Q8BKR5 712 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Tomm22Q9CPQ3 142 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Ccer1Q9CQL2 403 aa17.07■□□□□ 0.32
Vcan-205ENSMUST00000159337 Tjp1P39447 1745 aaKnown RBP17.06■□□□□ 0.32
Vcan-205ENSMUST00000159337 Cers3Q1A3B0 383 aa17.06■□□□□ 0.32
Vcan-205ENSMUST00000159337 Znf532Q6NXK2 1036 aa17.06■□□□□ 0.32
Vcan-205ENSMUST00000159337 Tmem87bQ8BKU8 555 aa17.06■□□□□ 0.32
Vcan-205ENSMUST00000159337 Ddx27Q921N6 760 aaKnown RBP17.05■□□□□ 0.32
Vcan-205ENSMUST00000159337 Nop2Q922K7 793 aaKnown RBP17.05■□□□□ 0.32
Vcan-205ENSMUST00000159337 Erc1Q99MI1 1120 aa17.05■□□□□ 0.32
Vcan-205ENSMUST00000159337 Cct2P80314 535 aaKnown RBP17.05■□□□□ 0.32
Vcan-205ENSMUST00000159337 Trak2Q6P9N8 913 aa17.05■□□□□ 0.32
Vcan-205ENSMUST00000159337 Rufy2Q8R4C2 606 aa17.05■□□□□ 0.32
Vcan-205ENSMUST00000159337 Vps54Q5SPW0 977 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Adora1Q60612 326 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Ccdc82Q6PG04 518 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Pnpla2Q8BJ56 486 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Mei4Q8BRM6 389 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 TatQ8QZR1 454 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Acsbg1Q99PU5 721 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Zranb2Q9R020 330 aaKnown RBP17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 CoblQ5NBX1 1337 aaKnown RBP17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Samd1D3YXK1 519 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Zmynd15Q8C0R7 736 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Rassf8Q8CJ96 419 aa17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Pdia6Q922R8 440 aaKnown RBP17.04■□□□□ 0.32
Vcan-205ENSMUST00000159337 Trap1aP19473 224 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Igfbp6P47880 238 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Fsd1Q7TPM6 496 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Etf1Q8BWY3 437 aaKnown RBP17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Wnk3Q80XP9 1757 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Pramel3A2AHA7 463 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Gm7903A2AWL1 463 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 AV320801A2AWL3 467 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Gm15023L7MUB4 467 aa17.03■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms