RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Dcaf5Q80T85 946 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Ccz1Q8C1Y8 480 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Cwc25Q9DBF7 416 aa10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Psma5Q9Z2U1 241 aaKnown RBP10.22□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Adam1aQ60813 791 aa10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Znf532Q6NXK2 1036 aa10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 LarsQ8BMJ2 1178 aa10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Mical1Q8VDP3 1048 aa10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Gnl2Q99LH1 728 aaKnown RBP10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Smc1aQ9CU62 1233 aaKnown RBP10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Lonp2Q9DBN5 852 aa10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Add3Q9QYB5 706 aaKnown RBP10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 EcsitQ9QZH6 435 aa10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Uggt1Q6P5E4 1551 aa10.21□□□□□ -0.77
Col28a1-201ENSMUST00000115537 Gm3409A0A0G2JE67 319 aa10.21□□□□□ -0.78
Col28a1-201ENSMUST00000115537 F2rP30558 430 aa10.21□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Prune1Q8BIW1 454 aa10.21□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Lmbr1lQ9D1E5 489 aa10.21□□□□□ -0.78
Col28a1-201ENSMUST00000115537 TnrQ8BYI9 1358 aa10.21□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Samsn1P57725 372 aa10.21□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ncbp3Q8BZR9 615 aaKnown RBP10.21□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ttc5Q99LG4 440 aa10.21□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Nfe2l3Q9WTM4 660 aa10.21□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Dctn1O08788 1281 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 MycnP03966 462 aaKnown RBP10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Gabpb2P81069 414 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 TrhQ62361 256 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ppp1r42Q8R1Z4 357 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Vps33aQ9D2N9 598 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Atg4a-psA0A0G2JFS9 396 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Slc20a2Q80UP8 656 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Atg4aQ8C9S8 396 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Pcdhgc5Q91XW9 944 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 PigbQ9JJQ0 542 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ccdc121E9Q6D3 323 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 NppbP40753 121 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Washc4Q3UMB9 1173 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Jakmip3Q5DTN8 844 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 SympkQ80X82 1284 aa10.2□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Spata31d1bE9QA57 1361 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Esco1Q69Z69 843 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Nat10Q8K224 1024 aaKnown RBP10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Dpf1Q9QX66 387 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Atp1a4Q9WV27 1032 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Cep170bQ80U49 1574 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Gm7347D3YYI9 267 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Tpm3-rs7D3Z2H9 248 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Speer4aF8VPX6 267 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 PdiltQ9DAN1 588 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Zcchc17Q9ESX4 241 aaKnown RBP10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Atp2b1G5E829 1220 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Prl7d1P04769 244 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ercc3P49135 783 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Gng11P61953 73 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Cap2Q9CYT6 476 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Dydc1Q9D9T0 175 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 P2rx7Q9Z1M0 595 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Setd1aE9PYH6 1716 aa10.19□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Smarcc2Q6PDG5 1213 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Slc14a2Q8R4T9 930 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 OscarQ8VBT3 265 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Creld2Q9CYA0 350 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Irx5Q9JKQ4 484 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ubn2Q80WC1 1314 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Arhgef28P97433 1693 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Kdm6aO70546 1401 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Nid2O88322 1403 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ap5z1Q3U829 807 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Tubb4aQ9D6F9 444 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Iqgap3F8VQ29 1632 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Xrn1P97789 1719 aaKnown RBP10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Trim30cD3YVI9 513 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Gcom1E9PZ54 550 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Cdk4P30285 303 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 MyzapQ3UIJ9 466 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 ZwintQ9CQU5 252 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Dip2aQ8BWT5 1523 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Lrriq3Q14DL3 633 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Gnat3Q3V3I2 354 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ccdc57Q6PHN1 1016 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Arid5bQ8BM75 1188 aaKnown RBP10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Rec8Q8C5S7 591 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Aldh1l2Q8K009 923 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Slc26a8Q8R0C3 999 aa10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Bicc1Q99MQ1 977 aaKnown RBP10.18□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ice2Q3UZ18 988 aaKnown RBP10.17□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Gm12185Q5NCB2 835 aa10.17□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ube2q2Q8K2Z8 378 aa10.17□□□□□ -0.78
Col28a1-201ENSMUST00000115537 St5Q924W7 1134 aa10.17□□□□□ -0.78
Col28a1-201ENSMUST00000115537 PtpruB1AUH1 1446 aa10.17□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Gsdma2Q32M21 443 aa10.17□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Bloc1s2Q9CWG9 143 aa10.17□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ppp2r3dQ9Z176 491 aa10.17□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Lamb3Q61087 1168 aa10.17□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Cd22P35329 862 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Glg1Q61543 1175 aaKnown RBP10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Srek1Q8BZX4 494 aaKnown RBP10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Ccdc73Q8CDM4 1066 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Srgap1Q91Z69 1062 aa10.16□□□□□ -0.78
Col28a1-201ENSMUST00000115537 Osbpl5Q9ER64 874 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms