RNA–Protein interactions for RNA: ENSMUST00000111046.8

Bdnf-206, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,819 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-206ENSMUST00000111046 Flt4P35917 1363 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Msh6P54276 1358 aaKnown RBP10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Ugt1a5B2RT14 529 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Zkscan7E9PVW1 718 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Cdkl5Q3UTQ8 938 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Snx13Q6PHS6 957 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Ssfa2Q922B9 1252 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Ndufa8Q9DCJ5 172 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Siglec1Q62230 1695 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Cfap73J3QPZ5 306 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Cops6O88545 324 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Tpm2P58774 284 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 NfkbibQ60778 359 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Nid2O88322 1403 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 FanccP50652 591 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Ccp110Q7TSH4 1004 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Ripor2Q80U16 1078 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Zkscan8Q8BSL0 588 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Naa30Q8CES0 364 aa10.28□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Ltbp4Q8K4G1 1666 aa10.27□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Speer4dL7N216 212 aa10.27□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Kdm4aQ8BW72 1064 aa10.27□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Nfat5Q9WV30 1534 aa10.27□□□□□ -0.76
Bdnf-206ENSMUST00000111046 Elmsan1E9Q2I4 1089 aaKnown RBP10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Anxa1P10107 346 aaKnown RBP10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ms4a2P20490 235 aa10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Zdhhc9P59268 364 aa10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ptcd1Q8C2E4 695 aaKnown RBP10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Prl7a2O54831 253 aa10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 TsksO54887 585 aa10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Tnni2P13412 182 aa10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ddit3P35639 168 aa10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 TbcaP48428 108 aaKnown RBP10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Pkp1P97350 728 aaKnown RBP10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ehmt1Q5DW34 1296 aa10.27□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Pnpla7A2AJ88 1352 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Dnai2A2AC93 623 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Usp25P57080 1055 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Mtmr3Q8K296 1196 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Rbm5Q91YE7 815 aaKnown RBP10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 BrapQ99MP8 591 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Hvcn1Q3U2S8 269 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 U2af1l4Q8BGJ9 220 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Trim52Q8CDV4 233 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Cnot6lQ8VEG6 555 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Mmel1Q9JLI3 765 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Aox1O54754 1333 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 MypnQ5DTJ9 1315 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Gtf2f1Q3THK3 508 aaKnown RBP10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Nrxn3Q6P9K9 1571 aa10.26□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Atp8b3Q6UQ17 1335 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Leo1Q5XJE5 667 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ppm1mQ8BU27 406 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Cap2Q9CYT6 476 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Zbtb21E9Q444 1094 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Prpf4bQ61136 1007 aaKnown RBP10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Smc2Q8CG48 1191 aaKnown RBP10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ccdc112A0AUP1 442 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Gm9992B2RWK3 458 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ftl2P49945 183 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ddb1Q3U1J4 1140 aaKnown RBP10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Unc93aQ710D3 458 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Lmod1Q8BVA4 595 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Tmc2Q8R4P4 888 aa10.25□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Gas2l3Q3UWW6 683 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Tmem143Q8VD26 458 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ginm1Q91WR6 327 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Rbm10Q99KG3 930 aaKnown RBP10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Cdhr2E9Q7P9 1308 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Slc7a3P70423 618 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ubash3aQ3V3E1 624 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Cfap69Q8BH53 942 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Me3Q8BMF3 604 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ncoa5Q91W39 579 aaKnown RBP10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Zbtb43Q9DAI4 467 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Hdac6Q9Z2V5 1149 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Kcna4Q61423 654 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Itga6Q61739 1091 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Pdcl2Q78Y63 240 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Tbc1d4Q8BYJ6 1307 aa10.24□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Atp10bB1AWN4 1474 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Metap2O08663 478 aaKnown RBP10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Gabpb2P81069 414 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Zc3h12cQ5DTV4 884 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Dcaf5Q80T85 946 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Miga2Q8BK03 593 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 StrbpQ91WM1 672 aaKnown RBP10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Gigyf1Q99MR1 1044 aaKnown RBP10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Appbp2Q9DAX9 585 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Gm29094F6Q785 221 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Tyro3P55144 880 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Ell2Q3UKU1 639 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Pla2g4fQ50L41 855 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Mrpl50Q8VDT9 159 aaKnown RBP10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Pdia6Q922R8 440 aaKnown RBP10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 MthfsQ9D110 203 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Pard3Q99NH2 1333 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Pdia4P08003 638 aaKnown RBP10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Nkx2-3P97334 362 aa10.23□□□□□ -0.77
Bdnf-206ENSMUST00000111046 Atp8a2P98200 1148 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms