RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 PtprmP28828 1452 aa8.65□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cdk12Q14AX6 1484 aaKnown RBP8.65□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ppp1r15aP17564 657 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Klra4Q60651 263 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Fhod1Q6P9Q4 1197 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 TxlnaQ6PAM1 554 aaKnown RBP8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Atg3Q9CPX6 314 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 SufuQ9Z0P7 484 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 CemipQ8BI06 1361 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Arhgap23Q69ZH9 1483 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ppfia1B2RXQ2 1266 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ppfia4B8QI36 1187 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Csrnp1P59054 583 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cct4P80315 539 aaKnown RBP8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Tubb5P99024 444 aaKnown RBP8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Atp8b1Q148W0 1251 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Aifm3Q3TY86 605 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ctnna3Q65CL1 895 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Map3k11Q80XI6 850 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ccdc12Q8R344 166 aaKnown RBP8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Eif3aP23116 1344 aaKnown RBP8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Mcmdc2E9Q956 681 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Mei4Q8BRM6 389 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Pwp2Q8BU03 919 aaKnown RBP8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Sh2b1Q91ZM2 756 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Nrxn1Q9CS84 1514 aa8.64□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Tpx2A2APB8 745 aaKnown RBP8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 F2rP30558 430 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Mmp14P53690 582 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Lig3P97386 1015 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ano1Q8BHY3 960 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Rassf10Q8BL43 508 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 RargP18911 458 aaKnown RBP8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Evi5P97366 809 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Atp8b2P98199 1209 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cfap69Q8BH53 942 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Brf1Q8CFK2 676 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 SyncQ9EPM5 470 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 NpatQ8BMA5 1420 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Eef2kO08796 724 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Mdh1P14152 334 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Specc1lQ2KN98 1118 aaKnown RBP8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ubash3aQ3V3E1 624 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Tsr2Q8C8T8 191 aa8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Pes1Q9EQ61 584 aaKnown RBP8.63□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Map3k19E9Q3S4 1311 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Tbc1d4Q8BYJ6 1307 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 FanccP50652 591 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Q3TQI7 289 aaKnown RBP8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Slc4a10Q5DTL9 1118 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ifit2Q64112 472 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Eif3cQ8R1B4 911 aaKnown RBP8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ccdc47Q9D024 483 aaKnown RBP8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Hip1rQ9JKY5 1068 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Adamts7Q68SA9 1657 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Nf2P46662 596 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cdr2P97817 455 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cdc37Q61081 379 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Sdad1Q80UZ2 687 aaKnown RBP8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Atf7Q8R0S1 413 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Abcb6Q9DC29 842 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Qser1A2BIE1 1698 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Krt222Q8CCX5 294 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Phldb2Q8K1N2 1249 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Klhdc4Q921I2 584 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 HnrnpmQ9D0E1 729 aaKnown RBP8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Stxbp4Q9WV89 557 aa8.62□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Prdm2A2A7B5 1709 aaKnown RBP8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 MmeQ61391 750 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Unc5clQ6R653 518 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ccdc93Q7TQK5 629 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Nek5Q7TSC3 627 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Rec8Q8C5S7 591 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Rab3il1Q8VDV3 383 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Osbpl1aQ91XL9 950 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Cbx8Q9QXV1 362 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 CoblQ5NBX1 1337 aaKnown RBP8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Tpm3-rs7D3Z2H9 248 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Lamb3Q61087 1168 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Dhx40Q6PE54 779 aaKnown RBP8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 GzmnQ920S1 248 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Gm6588E9Q3K0 461 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 TrdnE9Q9K5 693 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 PnnO35691 725 aaKnown RBP8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Chl1P70232 1209 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Atp1a2Q6PIE5 1020 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Tubb2aQ7TMM9 445 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ppm1eQ80TL0 749 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ppp2r2cQ8BG02 447 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Tubb2bQ9CWF2 445 aa8.61□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Rbm8a2A0A0N4SUH6 174 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 FosbP13346 338 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Stat1P42225 749 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ppp1r7Q3UM45 361 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Sgsm2Q80U12 1005 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Trim6Q8BGE7 488 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Dnajc5gQ8C632 165 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Stk38Q91VJ4 465 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Rbm8aQ9CWZ3 174 aa8.6□□□□□ -1.03
Bdnf-204ENSMUST00000111044 Ercc6l2Q9JIM3 1537 aa8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms