RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Rtkn2Q14B46 604 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Plekhf1Q3TB82 279 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Mctp2Q5RJH2 878 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Gimap8Q75N62 688 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 KinQ8K339 391 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Ccdc7Q9D541 371 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 PhaxQ9JJT9 385 aaKnown RBP17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 C4bP01029 1738 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Kcnb2A6H8H5 907 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Elmsan1E9Q2I4 1089 aaKnown RBP17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Ercc3P49135 783 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Pkp1P97350 728 aaKnown RBP17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Nlrp9aQ66X03 949 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Trim56Q80VI1 734 aaKnown RBP17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Slc39a11Q8BWY7 342 aa17.73■□□□□ 0.43
Nup88-202ENSMUST00000108530 Golgb1E9PVZ8 3238 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 Slurp2P0DP59 97 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 Sept1P42209 366 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 RtcbQ99LF4 505 aaKnown RBP17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 CpvlQ9D3S9 478 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 Dpf1Q9QX66 387 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 Npy5rO70342 466 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 Zdhhc9P59268 364 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 Plbd2Q3TCN2 594 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 Erc1Q99MI1 1120 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 Q9D9S1 216 aa17.72■□□□□ 0.43
Nup88-202ENSMUST00000108530 CoblQ5NBX1 1337 aaKnown RBP17.71■□□□□ 0.43
Nup88-202ENSMUST00000108530 Smarce1O54941 411 aaKnown RBP17.71■□□□□ 0.43
Nup88-202ENSMUST00000108530 Znf496Q5SXI5 585 aa17.71■□□□□ 0.43
Nup88-202ENSMUST00000108530 Ift57Q8BXG3 429 aa17.71■□□□□ 0.43
Nup88-202ENSMUST00000108530 Tmem143Q8VD26 458 aa17.71■□□□□ 0.43
Nup88-202ENSMUST00000108530 Mrpl50Q8VDT9 159 aaKnown RBP17.71■□□□□ 0.43
Nup88-202ENSMUST00000108530 Sept12Q9D451 317 aa17.71■□□□□ 0.43
Nup88-202ENSMUST00000108530 Kcnq5Q9JK45 933 aa17.71■□□□□ 0.43
Nup88-202ENSMUST00000108530 Foxo3Q9WVH4 672 aa17.71■□□□□ 0.43
Nup88-202ENSMUST00000108530 Rassf8Q8CJ96 419 aa17.71■□□□□ 0.42
Nup88-202ENSMUST00000108530 Kcnq3Q8K3F6 873 aa17.71■□□□□ 0.42
Nup88-202ENSMUST00000108530 Atf7Q8R0S1 413 aa17.71■□□□□ 0.42
Nup88-202ENSMUST00000108530 Emilin1Q99K41 1017 aa17.71■□□□□ 0.42
Nup88-202ENSMUST00000108530 Rbm33Q9CXK9 1231 aaKnown RBP17.71■□□□□ 0.42
Nup88-202ENSMUST00000108530 Npc1l1Q6T3U4 1333 aa17.7■□□□□ 0.42
Nup88-202ENSMUST00000108530 Prl7a2O54831 253 aa17.7■□□□□ 0.42
Nup88-202ENSMUST00000108530 Cpa2Q504N0 417 aa17.7■□□□□ 0.42
Nup88-202ENSMUST00000108530 Map10Q8BJS7 891 aa17.7■□□□□ 0.42
Nup88-202ENSMUST00000108530 Sp8Q8BMJ8 486 aa17.7■□□□□ 0.42
Nup88-202ENSMUST00000108530 Gja10Q9WUS4 505 aa17.7■□□□□ 0.42
Nup88-202ENSMUST00000108530 Ankrd13dQ6PD24 605 aa17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Fam160b2Q80YR2 744 aa17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Lrp5Q91VN0 1614 aa17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 1700029H14RikE9PY36 240 aa17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Rasa1E9PYG6 1038 aa17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Rnf20Q5DTM8 973 aa17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Fnbp4Q6ZQ03 1031 aa17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Ptcd1Q8C2E4 695 aaKnown RBP17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Ttc14Q9CSP9 761 aa17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Ppil4Q9CXG3 492 aaKnown RBP17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Plch1Q4KWH5 1682 aa17.69■□□□□ 0.42
Nup88-202ENSMUST00000108530 Eva1cP58659 440 aa17.68■□□□□ 0.42
Nup88-202ENSMUST00000108530 Edrf1Q6GQV7 1239 aa17.68■□□□□ 0.42
Nup88-202ENSMUST00000108530 Lgr5Q9Z1P4 907 aa17.68■□□□□ 0.42
Nup88-202ENSMUST00000108530 Atp6v1dP57746 247 aa17.68■□□□□ 0.42
Nup88-202ENSMUST00000108530 Hspd1P63038 573 aaKnown RBP17.68■□□□□ 0.42
Nup88-202ENSMUST00000108530 Pram1Q6BCL1 675 aa17.68■□□□□ 0.42
Nup88-202ENSMUST00000108530 Ufl1Q8CCJ3 793 aaKnown RBP17.68■□□□□ 0.42
Nup88-202ENSMUST00000108530 RubcnlQ3TD16 648 aa17.67■□□□□ 0.42
Nup88-202ENSMUST00000108530 Speer4dL7N216 212 aa17.67■□□□□ 0.42
Nup88-202ENSMUST00000108530 Casp1P29452 402 aa17.67■□□□□ 0.42
Nup88-202ENSMUST00000108530 Syt1P46096 421 aa17.67■□□□□ 0.42
Nup88-202ENSMUST00000108530 DekQ7TNV0 380 aaKnown RBP17.67■□□□□ 0.42
Nup88-202ENSMUST00000108530 Bag4Q8CI61 457 aa17.67■□□□□ 0.42
Nup88-202ENSMUST00000108530 Gm4340L7N2C4 268 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 IntuQ059U7 942 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 AidaQ8C4Q6 305 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 Pdlim2Q8R1G6 349 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 Casz1Q9CWL2 1761 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 Prl3d1P18121 224 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 Kiaa0319Q5SZV5 1081 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 PogkQ80TC5 607 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 Nol12Q8BG17 217 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 Usp44Q8C2S0 711 aa17.66■□□□□ 0.42
Nup88-202ENSMUST00000108530 Setdb1O88974 1307 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Arid3aQ62431 601 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 St18Q80TY4 1045 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Znfx1Q8R151 1909 aaKnown RBP17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Irgm2A0A140LIF8 407 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 GabrdP22933 449 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Pla2g4fQ50L41 855 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Hand2Q61039 217 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Rps6kb1Q8BSK8 525 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Amhr2Q8K592 568 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Riok1Q922Q2 567 aa17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Psma5Q9Z2U1 241 aaKnown RBP17.65■□□□□ 0.42
Nup88-202ENSMUST00000108530 Ddx19aQ61655 478 aaKnown RBP17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Kiaa0753Q6A000 959 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Tbc1d7Q9D0K0 293 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Ube3bQ9ES34 1070 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Hmg20bQ9Z104 317 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Zfyve9A2A8R0 1397 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Cyp2d9P11714 504 aa17.64■□□□□ 0.41
Nup88-202ENSMUST00000108530 Ppp6r1Q7TSI3 856 aa17.64■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms