RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Usp17lbE9Q9U0 468 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Psmd14O35593 310 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Rhbdl3P58873 404 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 EspnlQ3UYR4 1005 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Tom1l2Q5SRX1 507 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Znf428Q8C1M2 176 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Slc14a2Q8R4T9 930 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Ciao1Q99KN2 339 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Osbpl5Q9ER64 874 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Dpp7Q9ET22 506 aa15.23■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Brpf1B2RRD7 1212 aa15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Anxa1P10107 346 aaKnown RBP15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Rangap1P46061 589 aaKnown RBP15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 GmpsQ3THK7 693 aa15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Rbm27Q5SFM8 1060 aaKnown RBP15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Gja3Q64448 417 aa15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Atg9aQ68FE2 551 aa15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Gm2163Q6PCY5 473 aa15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Kcnq5Q9JK45 933 aa15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Nfe2l3Q9WTM4 660 aa15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Tnip1Q9WUU8 647 aa15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 CpdO89001 1377 aa15.22■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Atp8a2P98200 1148 aa15.21■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Maco1Q7TQE6 664 aaKnown RBP15.21■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Ubxn2aQ99KJ0 258 aa15.21■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Sh3bp5Q9Z131 463 aa15.21■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Arfgef1G3X9K3 1846 aaKnown RBP15.21■□□□□ 0.03
Ccdc28a-202ENSMUST00000080860 Chd5A2A8L1 1946 aa15.21■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Myh15E9Q264 1925 aa15.2■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Pde8bE9Q4S1 865 aa15.2■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Eya2O08575 532 aa15.2■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 NyxP83503 476 aa15.2■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Nutm1Q8BHP2 1126 aa15.2■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Tmem87bQ8BKU8 555 aa15.2■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Tmem67Q8BR76 992 aa15.2■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Ncoa5Q91W39 579 aaKnown RBP15.2■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Scn10aQ6QIY3 1958 aa15.2■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 PnnO35691 725 aaKnown RBP15.19■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Csrnp1P59054 583 aa15.19■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Znf330Q922H9 316 aa15.19■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Mrpl12Q9DB15 201 aaKnown RBP15.19■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 MvpQ9EQK5 861 aa15.19■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Ier5O89113 308 aa15.18■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Sult6b1P0CC03 303 aa15.18■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 L3mbtl2P59178 703 aa15.18■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Ascc2Q91WR3 749 aa15.18■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Ndfip2Q91ZP6 311 aa15.18■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Tceal9Q9DD24 104 aa15.18■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Zcchc17Q9ESX4 241 aaKnown RBP15.18■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Lama2Q60675 3118 aaKnown RBP15.18■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Gnai2P08752 355 aaKnown RBP15.17■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Trim58Q5NCC9 485 aa15.17■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Agtpbp1Q641K1 1218 aa15.17■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Igf2bp3Q9CPN8 579 aaKnown RBP15.17■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Ppil2Q9D787 521 aa15.17■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Tbc1d8Q9Z1A9 1134 aa15.17■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Polr2aP08775 1970 aaKnown RBP15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Myh4Q5SX39 1939 aa15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Prkar2bP31324 416 aa15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Jarid2Q62315 1234 aa15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Fam102bQ8BQS4 339 aa15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Tmc2Q8R4P4 888 aa15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Rtn4Q99P72 1162 aaKnown RBP15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Mtmr2Q9Z2D1 643 aa15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Kdm3aQ6PCM1 1323 aa15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Nphp3Q7TNH6 1325 aa15.16■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Irf6P97431 467 aa15.15■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Ell2Q3UKU1 639 aa15.15■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Ddx31Q6NZQ2 687 aaKnown RBP15.15■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Zkscan8Q8BSL0 588 aa15.15■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Mast3Q3U214 1321 aa15.15■□□□□ 0.02
Ccdc28a-202ENSMUST00000080860 Znf692Q3U381 531 aa15.14■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Slc10a5Q5PT54 434 aa15.14■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Cnot7Q60809 285 aa15.14■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 VwdeQ6DFV8 926 aa15.14■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Rab3gap1Q80UJ7 981 aa15.14■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Ptrh1Q8BW00 204 aa15.14■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Angel2Q8K1C0 544 aa15.14■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 SisF8VQM5 1818 aa15.14■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Znf521Q6KAS7 1311 aa15.14■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Ankrd63A2ARS0 390 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Speer4dL7N216 212 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Gm4340L7N2C4 268 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Magea8O89012 320 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Hoxd11P23813 323 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 LeprP48356 1162 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Tm6sf1P58749 370 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Gm5592Q3V0A6 857 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Nlgn2Q69ZK9 836 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Ppp4r3aQ6P2K6 820 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Rwdd1Q9CQK7 243 aa15.13■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Casp1P29452 402 aa15.12■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Atp8b2P98199 1209 aa15.12■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Nlrp1aQ2LKU9 1182 aa15.12■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Dhx38Q80X98 1228 aa15.12■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Tm4sf4Q91XD3 202 aa15.12■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Trmt44Q9D2Q2 713 aa15.12■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 ParvgQ9ERD8 331 aa15.12■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 LratQ9JI60 231 aa15.12■□□□□ 0.01
Ccdc28a-202ENSMUST00000080860 Abcc4E9Q236 1325 aa15.12■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms