RNA–Protein interactions for RNA: ENSMUST00000078830.10

Rtn4-202, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 3,615 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-202ENSMUST00000078830 Lnx1O70263 728 aa14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Becn1O88597 448 aa14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Dnajc2P54103 621 aaKnown RBP14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Ppp6r1Q7TSI3 856 aa14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Ccer1Q9CQL2 403 aa14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Tns2Q8CGB6 1400 aa14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Slc4a1P04919 929 aa14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Hspd1P63038 573 aaKnown RBP14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Pram1Q6BCL1 675 aa14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Nxf7Q80SZ6 620 aaKnown RBP14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Clca2Q8BG22 942 aa14.28□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Mctp1E9PV86 951 aa14.27□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Lmtk3Q5XJV6 1424 aa14.27□□□□□ -0.12
Rtn4-202ENSMUST00000078830 Cyp19a1P28649 503 aa14.27□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Prdm1Q60636 856 aa14.27□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Gm21985Q6P6P5 1106 aa14.27□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Hmg20bQ9Z104 317 aa14.27□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Washc4Q3UMB9 1173 aa14.27□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Leo1Q5XJE5 667 aa14.27□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Sik1Q60670 779 aa14.27□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Trim34bJ3QNR8 485 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Eef2kO08796 724 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Abl1P00520 1123 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Dlg5E9Q9R9 1921 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Mybbp1aQ7TPV4 1344 aaKnown RBP14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Kcnb2A6H8H5 907 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Asap2Q7SIG6 958 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Zscan22Q8BGS5 496 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Tmem266Q8BZB3 538 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Qtrt2B8ZXI1 415 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 TsksO54887 585 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 R3hcc1Q8BSI6 488 aa14.26□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Ppp1r10Q80W00 888 aaKnown RBP14.25□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Sept12Q9D451 317 aa14.25□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Krt85Q9Z2T6 507 aa14.25□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Ifit1bl2Q3U687 466 aa14.25□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Pla2g4fQ50L41 855 aa14.25□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Myl10Q62082 202 aa14.25□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Trim34aQ99PP6 485 aa14.25□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Med4Q9CQA5 270 aa14.25□□□□□ -0.13
Rtn4-202ENSMUST00000078830 TnmdQ9EP64 317 aa14.25□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Emilin1Q99K41 1017 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 NgdnQ9DB96 315 aaKnown RBP14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Thsd7aQ69ZU6 1645 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Bin2D3Z6Q9 489 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Dhx16G3X8X0 1044 aaKnown RBP14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Cfap73J3QPZ5 306 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Adcy5P84309 1262 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Limch1Q3UH68 1057 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Itga6Q61739 1091 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Zfp113Q8C689 439 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Zeb2Q9R0G7 1215 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 CrcpO35427 148 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 CpvlQ9D3S9 478 aa14.24□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Rdm1Q9CQK3 281 aa14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Mapk8ip1Q9WVI9 707 aa14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Gm29094F6Q785 221 aa14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Fsd2Q8BZ52 692 aa14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Rufy2Q8R4C2 606 aa14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 MthfsQ9D110 203 aa14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Mrps25Q9D125 171 aaKnown RBP14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Acap3Q6NXL5 833 aa14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Larp6Q8BN59 492 aa14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Klc3Q91W40 508 aa14.23□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Slit1Q80TR4 1531 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Ddb1Q3U1J4 1140 aaKnown RBP14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Nlrp9aQ66X03 949 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Kdm4aQ8BW72 1064 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Lrrc2Q8VDB8 371 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Igbp1bQ9QZ29 343 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Agtpbp1Q641K1 1218 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Kiaa0754Q69ZZ9 979 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Usp44Q8C2S0 711 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Kcnn1Q9EQR3 537 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Znf326O88291 580 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Ccdc82Q6PG04 518 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Atp1a3Q6PIC6 1013 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Slx1bQ8BX32 270 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 E4f1Q8CCE9 783 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Cnot6lQ8VEG6 555 aa14.22□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Col4a1P02463 1669 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Zbtb38Q3LR78 1197 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Sptlc3Q8BG54 563 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Cep55Q8BT07 462 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Cyp2c23E9Q5K4 494 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Me1P06801 572 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Casp1P29452 402 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Eva1cP58659 440 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Esco1Q69Z69 843 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 DymQ8CHY3 669 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Fez1Q8K0X8 392 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 Fam13bQ8K2H3 851 aa14.21□□□□□ -0.13
Rtn4-202ENSMUST00000078830 1700006A11RikB9EHI3 544 aa14.21□□□□□ -0.14
Rtn4-202ENSMUST00000078830 Chrna2Q91X60 512 aa14.21□□□□□ -0.14
Rtn4-202ENSMUST00000078830 Robo1O89026 1612 aa14.2□□□□□ -0.14
Rtn4-202ENSMUST00000078830 Prr5lA2AVJ5 370 aa14.2□□□□□ -0.14
Rtn4-202ENSMUST00000078830 Cyp2d34L7N463 504 aa14.2□□□□□ -0.14
Rtn4-202ENSMUST00000078830 Zfp51Q3U4L8 781 aa14.2□□□□□ -0.14
Rtn4-202ENSMUST00000078830 U2af1l4Q8BGJ9 220 aa14.2□□□□□ -0.14
Rtn4-202ENSMUST00000078830 CerkQ8K4Q7 531 aa14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms