RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Trim39Q9ESN2 488 aa10.9□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Gm10073E9Q3T0 114 aa10.89□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 L3mbtl2P59178 703 aa10.89□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Fubp3Q3TIX6 575 aaKnown RBP10.89□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Q4VA45 678 aa10.89□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Slc7a6osQ7TPE5 306 aa10.89□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Snx29Q9D3S3 818 aa10.89□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Leng1Q9DB98 261 aa10.89□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Klf15Q9EPW2 415 aa10.89□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Cobll1Q3UMF0 1273 aa10.88□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Brip1Q5SXJ3 1174 aa10.88□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Gpr62Q80UC6 358 aa10.88□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Dars2Q8BIP0 653 aa10.88□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Cdk8Q8R3L8 464 aa10.88□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Otud1Q9CUB6 454 aa10.88□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Yod1Q8CB27 343 aa10.87□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Tor1aip1Q921T2 595 aaKnown RBP10.87□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Ces1hD3Z298 562 aa10.86□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Epha1Q60750 977 aa10.86□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Ccdc116Q80X53 541 aa10.86□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Galnt6Q8C7U7 622 aa10.86□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Fam129bQ8R1F1 749 aa10.86□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Pear1Q8VIK5 1034 aa10.86□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Slc35a4Q9D321 324 aa10.86□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Ehd4Q9EQP2 541 aa10.86□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Mtmr7Q9Z2C9 660 aa10.86□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Adam7O35227 789 aa10.85□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 MycP01108 439 aa10.85□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Rplp1P47955 114 aa10.85□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Foxd3Q61060 465 aa10.85□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Klhl23Q6GQU2 558 aa10.85□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Trim6Q8BGE7 488 aa10.85□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Osbpl2Q8BX94 484 aa10.85□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Rtp1Q8C8C1 263 aa10.85□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Btbd7Q8CFE5 1130 aa10.85□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Cntnap5cQ0V8T7 1305 aa10.84□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Pde4aO89084 844 aa10.84□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Adora2aQ60613 410 aa10.84□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Tmem177Q8BPE4 311 aa10.84□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Fam161aQ8QZV6 448 aa10.84□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Ggt7Q99JP7 662 aa10.84□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Lamc3Q9R0B6 1581 aa10.84□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Rsf1E9PWW9 1441 aaKnown RBP10.84□□□□□ -0.67
Ccdc54-201ENSMUST00000062439 Gm12355A2A4X6 163 aa10.83□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 SelpQ01102 768 aa10.83□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Samd11Q1RNF8 542 aa10.83□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Gbp9Q8BTS3 619 aa10.83□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Hnrnpul1Q8VDM6 859 aaKnown RBP10.83□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 3100002H09RikQ9CXW6 140 aa10.83□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Magi2Q9WVQ1 1275 aa10.83□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Ankmy2Q3TPE9 440 aa10.82□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Dennd1bQ3U1T9 766 aa10.82□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Skap2Q3UND0 358 aa10.82□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Ppme1Q8BVQ5 386 aa10.82□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Rell1Q8K2J7 272 aa10.82□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Slc51aQ8R000 340 aa10.82□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 CatsperzQ9CQP8 194 aa10.82□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Lrriq1Q0P5X1 1673 aa10.82□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Zfp605E9QAH2 694 aa10.81□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Bloc1s3Q5U5M8 195 aa10.81□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Ccdc85bQ6PDY0 202 aa10.81□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Sugp1Q8CH02 643 aaKnown RBP10.81□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Unc5bQ8K1S3 945 aa10.81□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Efcab12V9GXH0 673 aa10.81□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Kif21aQ9QXL2 1672 aa10.81□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Xpnpep3B7ZMP1 506 aaKnown RBP10.8□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Znf143O70230 638 aa10.8□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Irf3P70671 419 aa10.8□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Sv2cQ69ZS6 727 aa10.8□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Kcnq4Q9JK97 696 aa10.8□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Deaf1Q9Z1T5 566 aa10.8□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Cux2P70298 1426 aa10.8□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Kif15Q6P9L6 1387 aa10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Zscan20B2KFW1 1030 aa10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Stag2O35638 1231 aa10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 TaglnP37804 201 aaKnown RBP10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Rack1P68040 317 aaKnown RBP10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Ezh1P70351 747 aa10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Tusc1Q673H1 205 aa10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Fbxo33Q8VE08 562 aa10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Olfr781Q8VFZ8 311 aa10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Ddx41Q91VN6 622 aaKnown RBP10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Supt16hQ920B9 1047 aa10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Adam11Q9R1V4 773 aa10.79□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Hoxb1P17919 297 aa10.78□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Nbr1P97432 988 aa10.78□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 HiraQ61666 1015 aa10.78□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Mettl2Q8BMK1 389 aa10.78□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 HdlbpQ8VDJ3 1268 aaKnown RBP10.78□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Trim11Q99PQ2 467 aa10.78□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 DmgdhQ9DBT9 869 aa10.78□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Bcl11aQ9QYE3 773 aa10.78□□□□□ -0.68
Ccdc54-201ENSMUST00000062439 Bcl6P41183 707 aa10.77□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Cypt2Q6P924 180 aa10.77□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 WtipQ7TQJ8 398 aa10.77□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Upf1Q9EPU0 1124 aaKnown RBP10.77□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Sumo3Q9Z172 110 aa10.77□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Ap3b1Q9Z1T1 1105 aa10.77□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Top2bQ64511 1612 aa10.76□□□□□ -0.69
Ccdc54-201ENSMUST00000062439 Olfr414E9Q5P8 317 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms