RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 TnrQ8BYI9 1358 aa11.5□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Bmp2kQ91Z96 1138 aa11.5□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Gm45140A0A0N4SUM8 220 aa11.5□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ubap1lG3UW59 384 aa11.5□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Cyp2d10P24456 504 aa11.5□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Hand2Q61039 217 aa11.5□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Rbm17Q8JZX4 405 aaKnown RBP11.5□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Mrpl44Q9CY73 333 aaKnown RBP11.5□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ptcd1Q8C2E4 695 aaKnown RBP11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Atp2b1G5E829 1220 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ap5z1Q3U829 807 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Usp44Q8C2S0 711 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Robo1O89026 1612 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Cdk4P30285 303 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 TfrcQ62351 763 aaKnown RBP11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Spty2d1Q68FG3 682 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Gm21985Q6P6P5 1106 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Asic4Q7TNS7 539 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Mtmr3Q8K296 1196 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ubxn4Q8VCH8 506 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Tubb6Q922F4 447 aa11.49□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ccdc112A0AUP1 442 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Mtx1P47802 317 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 CrklP47941 303 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Gnat3Q3V3I2 354 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Gpatch3Q8BIY1 525 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Erc1Q99MI1 1120 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Dusp10Q9ESS0 483 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Simc1E9Q6E9 1354 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Tns3Q5SSZ5 1440 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Kiaa0753Q6A000 959 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ccdc82Q6PG04 518 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Golph3lQ8R088 285 aaKnown RBP11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Sult6b1P0CC03 303 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Trim56Q80VI1 734 aaKnown RBP11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Kcnk13Q8R1P5 405 aa11.48□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Bin1O08539 588 aaKnown RBP11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Stx1aO35526 288 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Slu7Q8BHJ9 585 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Dnaaf2Q8BPI1 814 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Tmem67Q8BR76 992 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Cyp2d34L7N463 504 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Clec11aO88200 328 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Frat1P70339 274 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Smarcc2Q6PDG5 1213 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ano10Q8BH79 659 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ddx60E9PZQ1 1711 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Syde2E9PUP1 1314 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Igflr1Q3U4N7 345 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ube2oQ6ZPJ3 1288 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Kcnq3Q8K3F6 873 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Efcab2Q9CQ46 164 aa11.47□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 TrdnE9Q9K5 693 aa11.46□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Rgs9O54828 675 aa11.46□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Hspd1P63038 573 aaKnown RBP11.46□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Lrrc8aQ80WG5 810 aa11.46□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Rufy2Q8R4C2 606 aa11.46□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Snw1Q9CSN1 536 aaKnown RBP11.46□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Gm21663A0A0G2JE01 267 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gm7361D3Z6R1 267 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 5031410I06RikE9Q4E0 267 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gm1979E9QAN3 267 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gm5862K7N5V5 267 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gm10220K7N660 267 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Scaf1Q5U4C3 1256 aaKnown RBP11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Cep135Q6P5D4 1140 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 CtifQ6PEE2 600 aaKnown RBP11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ddx58Q6Q899 926 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Zscan29E9Q5B4 869 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Hps3Q91VB4 1002 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Tomm22Q9CPQ3 142 aa11.46□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Prl3d3A0A0M6L0J6 224 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ankle2Q6P1H6 964 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 AidaQ8C4Q6 305 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 BrapQ99MP8 591 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Speer4bQ9D9F7 267 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Col14a1Q80X19 1797 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Zkscan4Q5SZT6 480 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Atg9aQ68FE2 551 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Dhx40Q6PE54 779 aaKnown RBP11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Terf2ipQ91VL8 393 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Col4a3bpQ9EQG9 624 aa11.45□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Rrp1P56183 494 aaKnown RBP11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Zfp397Q7TNK4 527 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Alg3Q8K2A8 438 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Farp2Q91VS8 1065 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 XpcP51612 930 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Tmem109Q3UBX0 243 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 BcanQ61361 883 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Q8BZJ8 459 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Stk38Q91VJ4 465 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Clic4Q9QYB1 253 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ubn2Q80WC1 1314 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Pramel3A2AHA7 463 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gm7903A2AWL1 463 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 AV320801A2AWL3 467 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gm15023L7MUB4 467 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 NfkbibQ60778 359 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 U2af1l4Q8BGJ9 220 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ttc19Q8CC21 365 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms