RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Fam228bQ497Q6 232 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Magea3Q6T340 320 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Pdzph1Q8BGR1 1238 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Tmem266Q8BZB3 538 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 KnstrnQ9D9Z1 312 aaKnown RBP10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Kcnq5Q9JK45 933 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Magea2Q9R2A2 320 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Slfn1Q9Z0I7 337 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Cyp2ab1S4R196 498 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 TsksO54887 585 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Sept1P42209 366 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Erc2Q6PH08 957 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Taf1dQ9D4V4 322 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Osbpl5Q9ER64 874 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Usp21Q9QZL6 566 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Golgb1E9PVZ8 3238 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Nrxn2E9Q7X7 1710 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Myh7Q91Z83 1935 aa10.84□□□□□ -0.67
Ccdc28a-201ENSMUST00000052648 Zkscan2G3X952 960 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Gm4340L7N2C4 268 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Kiaa0753Q6A000 959 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Best3Q6H1V1 669 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Asap2Q7SIG6 958 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Cog6Q8R3I3 657 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Taf5lQ91WQ5 589 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Slc4a1P04919 929 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 EgfrQ01279 1210 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Slc14a2Q8R4T9 930 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Kcnn1Q9EQR3 537 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Ccne2Q9Z238 404 aa10.83□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Hmox1P14901 289 aa10.82□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Sptlc3Q8BG54 563 aa10.82□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Hirip3Q8BLH7 601 aa10.82□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 ParvgQ9ERD8 331 aa10.82□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Rbbp6P97868 1790 aaKnown RBP10.82□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Casp1P29452 402 aa10.82□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Zbtb45Q52KG4 520 aa10.82□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Ufl1Q8CCJ3 793 aaKnown RBP10.82□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Setdb1O88974 1307 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Olfr247E9PVJ7 320 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Olfr819K7N727 320 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Rad23bP54728 416 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Krt25Q8VCW2 446 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Ttc5Q99LG4 440 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Sh3bp5lQ99LH9 392 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Mrps5Q99N87 432 aaKnown RBP10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Ubxn2bQ0KL01 331 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Cd248Q91V98 765 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Riok1Q922Q2 567 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Gdf11Q9Z1W4 405 aa10.81□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Rhbdl3P58873 404 aa10.8□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Ell2Q3UKU1 639 aa10.8□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 PrimpolQ6P1E7 537 aa10.8□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Fam160b2Q80YR2 744 aa10.8□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Camkk2Q8C078 588 aa10.8□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Psme4Q5SSW2 1843 aa10.8□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Vps54Q5SPW0 977 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Nlrp9aQ66X03 949 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Rhot2Q8JZN7 620 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Ppil4Q9CXG3 492 aaKnown RBP10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 TnksQ6PFX9 1320 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Nol8Q3UHX0 1147 aaKnown RBP10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 4930567H17RikQ3V0K5 233 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Pde3bQ61409 1100 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 ZyxQ62523 564 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Insm1Q63ZV0 521 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Abtb2Q7TQI7 1024 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Brf1Q8CFK2 676 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Noc3lQ8VI84 807 aaKnown RBP10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Fam84aQ9D650 292 aa10.79□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Atp6v1aP50516 617 aaKnown RBP10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 RestQ8VIG1 1082 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Mrpl12Q9DB15 201 aaKnown RBP10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Il1rapl2Q9ERS6 686 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Irs4Q9Z0Y7 1216 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Chd5A2A8L1 1946 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Carmil3Q3UFQ8 1375 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Mical3Q8CJ19 1993 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Rbbp8nlA2ABX0 614 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Prl3d1P18121 224 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Chrna5Q2MKA5 467 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 WdpcpQ8C456 722 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Rdm1Q9CQK3 281 aa10.78□□□□□ -0.68
Ccdc28a-201ENSMUST00000052648 Ankrd63A2ARS0 390 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Izumo3A6PWV3 263 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Klrk1O54709 232 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Csf1rP09581 977 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Unc5clQ6R653 518 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 HdlbpQ8VDJ3 1268 aaKnown RBP10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 CenppQ9CZ92 286 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Myoz2Q9JJW5 264 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ptf1aQ9QX98 324 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Gm38655A0A286YDK6 273 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Vsig10D3YX43 558 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Cyp3a57D3YYZ0 503 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Nedd4P46935 887 aaKnown RBP10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ccdc51Q3URS9 406 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Gm5592Q3V0A6 857 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 TrhQ62361 256 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Q9D2X8 372 aa10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms