RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Znf653Q6YND2 615 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 HmcesQ8R1M0 353 aaKnown RBP8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Rbm8a2A0A0N4SUH6 174 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Stox1B2RQL2 990 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Fam184aE9PW83 1143 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Mnat1P51949 309 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Tshz3Q8CGV9 1081 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Smtnl1Q99LM3 459 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Rbm8aQ9CWZ3 174 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Lmo7E9PYF4 1699 aaKnown RBP8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Calm1P0DP26 149 aaKnown RBP8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Calm2P0DP27 149 aaKnown RBP8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Calm3P0DP28 149 aaKnown RBP8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Pla2g4fQ50L41 855 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Tekt3Q6X6Z7 490 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Arhgef6Q8K4I3 771 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 LlphQ9D945 130 aaKnown RBP8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Cavin1O54724 392 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Tom1l2Q5SRX1 507 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Fchsd1Q6PFY1 688 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Tbc1d5Q80XQ2 815 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Krt23Q99PS0 422 aa8.6□□□□□ -1.03
Usp40-201ENSMUST00000040783 Abca16E9PWJ7 1678 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Rad50P70388 1312 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Mybl2P48972 704 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Rab3gap1Q80UJ7 981 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Ankrd23Q812A3 306 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 CpvlQ9D3S9 478 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Plxnc1Q9QZC2 1574 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 AU022751B1B0V2 589 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Dctn1O08788 1281 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Eif6O55135 245 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Cep112Q5PR68 954 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Sh3d21Q7TSG5 549 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Nek11Q8C0Q4 628 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 DymQ8CHY3 669 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Frat2Q8K025 231 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Dph6Q9CQ28 267 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Bloc1s2Q9CWG9 143 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Q9D5Q8 446 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Lamb3Q61087 1168 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 SltmQ8CH25 1031 aaKnown RBP8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 TxlnbQ8VBT1 685 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Hdac6Q9Z2V5 1149 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Usp54Q8BL06 1588 aaKnown RBP8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Sult6b1P0CC03 303 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Atg3Q9CPX6 314 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Stx6Q9JKK1 255 aa8.59□□□□□ -1.03
Usp40-201ENSMUST00000040783 Ppfibp2O35711 882 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Nf2P46662 596 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Rnf216P58283 853 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Clip2Q9Z0H8 1047 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Jarid2Q62315 1234 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Ddx10Q80Y44 875 aaKnown RBP8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Erlin2Q8BFZ9 340 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Themis2Q91YX0 663 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Nsd3Q6P2L6 1439 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Smarcc2Q6PDG5 1213 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Tmc2Q8R4P4 888 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 SrrtQ99MR6 875 aaKnown RBP8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 CenppQ9CZ92 286 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Dpp7Q9ET22 506 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Ktn1Q61595 1327 aaKnown RBP8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 TnksQ6PFX9 1320 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Snapc4Q8BP86 1333 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Zfyve16Q80U44 1528 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Cnksr1A2A9K7 700 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Gm42641I6L9G2 585 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Tacc1Q6Y685 774 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Hook2Q7TMK6 716 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 U2af1l4Q8BGJ9 220 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 AtripQ8BMG1 785 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 Kif21bQ9QXL1 1668 aa8.58□□□□□ -1.04
Usp40-201ENSMUST00000040783 AceP09470 1312 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Stk36Q69ZM6 1316 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 TsksO54887 585 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Dnm1P39053 867 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Eif4a1P60843 406 aaKnown RBP8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Fam107bQ3TGF2 131 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Fam170aQ66LM6 333 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Ccdc66Q6NS45 935 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Exoc8Q6PGF7 716 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Dcaf5Q80T85 946 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Ranbp6Q8BIV3 1105 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Krt79Q8VED5 531 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Ttc21aQ8C0S4 1314 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Fhod3Q76LL6 1578 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Pim2Q62070 370 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Trim28Q62318 834 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Fam177a1Q8BR63 207 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Cfap53Q9D439 514 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Sil1Q9EPK6 465 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Atp8a2P98200 1148 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Tns3Q5SSZ5 1440 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Mast3Q3U214 1321 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Pafah1b1P63005 410 aaKnown RBP8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 P4ha1Q60715 534 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Slu7Q8BHJ9 585 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Cc2d1bQ8BRN9 848 aa8.57□□□□□ -1.04
Usp40-201ENSMUST00000040783 Gnl2Q99LH1 728 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms