RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Card6E9PWH2 1175 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Zscan29E9Q5B4 869 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ms4a1P19437 291 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 NpeppsQ11011 920 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Cdca8Q8BHX3 289 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Dzip1Q8BMD2 852 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Chmp7Q8R1T1 451 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Trim59Q922Y2 403 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Snw1Q9CSN1 536 aaKnown RBP17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 AtrnQ9WU60 1428 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Arid5bQ8BM75 1188 aaKnown RBP17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Q8C5K5 320 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Dusp10Q9ESS0 483 aa17.6■□□□□ 0.41
Nup54-201ENSMUST00000038514 Rgs9O54828 675 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Cyp2d10P24456 504 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ube2oQ6ZPJ3 1288 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Hook1Q8BIL5 728 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Pus3Q9JI38 481 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 LratQ9JI60 231 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Exosc10P56960 887 aaKnown RBP17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ccdc129Q14B48 1034 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Nlrp1aQ2LKU9 1182 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 TrhQ62361 256 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Gm21985Q6P6P5 1106 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Dhx40Q6PE54 779 aaKnown RBP17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Lrrc8aQ80WG5 810 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Rassf8Q8CJ96 419 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 TkfcQ8VC30 578 aa17.59■□□□□ 0.41
Nup54-201ENSMUST00000038514 Nxf7Q80SZ6 620 aaKnown RBP17.58■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ano10Q8BH79 659 aa17.58■□□□□ 0.41
Nup54-201ENSMUST00000038514 Slc39a6Q8C145 765 aa17.58■□□□□ 0.41
Nup54-201ENSMUST00000038514 Kcnk13Q8R1P5 405 aa17.58■□□□□ 0.41
Nup54-201ENSMUST00000038514 Erc1Q99MI1 1120 aa17.58■□□□□ 0.41
Nup54-201ENSMUST00000038514 BrapQ99MP8 591 aa17.58■□□□□ 0.41
Nup54-201ENSMUST00000038514 Ank1Q02357 1862 aa17.58■□□□□ 0.4
Nup54-201ENSMUST00000038514 Gnat3Q3V3I2 354 aa17.58■□□□□ 0.4
Nup54-201ENSMUST00000038514 TfrcQ62351 763 aaKnown RBP17.58■□□□□ 0.4
Nup54-201ENSMUST00000038514 Soga3Q6NZL0 945 aa17.58■□□□□ 0.4
Nup54-201ENSMUST00000038514 Ppp4r3aQ6P2K6 820 aa17.58■□□□□ 0.4
Nup54-201ENSMUST00000038514 Ints4Q8CIM8 964 aa17.58■□□□□ 0.4
Nup54-201ENSMUST00000038514 OptnQ8K3K8 584 aa17.58■□□□□ 0.4
Nup54-201ENSMUST00000038514 PigbQ9JJQ0 542 aa17.58■□□□□ 0.4
Nup54-201ENSMUST00000038514 Pde3aQ9Z0X4 1141 aa17.58■□□□□ 0.4
Nup54-201ENSMUST00000038514 Ap5z1Q3U829 807 aa17.57■□□□□ 0.4
Nup54-201ENSMUST00000038514 ZyxQ62523 564 aa17.57■□□□□ 0.4
Nup54-201ENSMUST00000038514 Zfp397Q7TNK4 527 aa17.57■□□□□ 0.4
Nup54-201ENSMUST00000038514 Cnpy2Q9QXT0 182 aa17.57■□□□□ 0.4
Nup54-201ENSMUST00000038514 Cct2P80314 535 aaKnown RBP17.56■□□□□ 0.4
Nup54-201ENSMUST00000038514 Ddx58Q6Q899 926 aa17.56■□□□□ 0.4
Nup54-201ENSMUST00000038514 Slu7Q8BHJ9 585 aa17.56■□□□□ 0.4
Nup54-201ENSMUST00000038514 Golph3lQ8R088 285 aaKnown RBP17.56■□□□□ 0.4
Nup54-201ENSMUST00000038514 Sh3bp5Q9Z131 463 aa17.56■□□□□ 0.4
Nup54-201ENSMUST00000038514 Wnk3Q80XP9 1757 aa17.56■□□□□ 0.4
Nup54-201ENSMUST00000038514 Atp2b1G5E829 1220 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Sult6b1P0CC03 303 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 AppP12023 770 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Atp1a3Q6PIC6 1013 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Nwd2Q6P5U7 1742 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Sos2Q02384 1333 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Zpr1Q62384 459 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Cep135Q6P5D4 1140 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Gpatch3Q8BIY1 525 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Golim4Q8BXA1 655 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Col4a3bpQ9EQG9 624 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 Abca15E9PWH4 1668 aa17.55■□□□□ 0.4
Nup54-201ENSMUST00000038514 CrklP47941 303 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Zkscan4Q5SZT6 480 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 NfkbibQ60778 359 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Fkbp5Q64378 456 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Atg9aQ68FE2 551 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Atad2Q8CDM1 1040 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Pms1Q8K119 917 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Dnaaf4Q8R368 420 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Col4a1P02463 1669 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Cyp2d34L7N463 504 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Ankle2Q6P1H6 964 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Asic4Q7TNS7 539 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Lmbrd2Q8C561 694 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Rufy2Q8R4C2 606 aa17.54■□□□□ 0.4
Nup54-201ENSMUST00000038514 Ppfia3P60469 1194 aa17.53■□□□□ 0.4
Nup54-201ENSMUST00000038514 Q8BZJ8 459 aa17.53■□□□□ 0.4
Nup54-201ENSMUST00000038514 CrebrfQ8CDG5 640 aaKnown RBP17.53■□□□□ 0.4
Nup54-201ENSMUST00000038514 Tmc2Q8R4P4 888 aa17.53■□□□□ 0.4
Nup54-201ENSMUST00000038514 Tcof1O08784 1320 aaKnown RBP17.53■□□□□ 0.4
Nup54-201ENSMUST00000038514 Prl3d3A0A0M6L0J6 224 aa17.53■□□□□ 0.4
Nup54-201ENSMUST00000038514 Fsd1Q7TPM6 496 aa17.53■□□□□ 0.4
Nup54-201ENSMUST00000038514 Hspd1P63038 573 aaKnown RBP17.52■□□□□ 0.4
Nup54-201ENSMUST00000038514 Ncaph2Q8BSP2 607 aa17.52■□□□□ 0.4
Nup54-201ENSMUST00000038514 Otud6bQ8K2H2 294 aa17.52■□□□□ 0.4
Nup54-201ENSMUST00000038514 Creld2Q9CYA0 350 aa17.52■□□□□ 0.4
Nup54-201ENSMUST00000038514 Naa16Q9DBB4 864 aa17.52■□□□□ 0.4
Nup54-201ENSMUST00000038514 Usp42B2RQC2 1324 aaKnown RBP17.52■□□□□ 0.39
Nup54-201ENSMUST00000038514 Syde2E9PUP1 1314 aa17.52■□□□□ 0.39
Nup54-201ENSMUST00000038514 Npc1l1Q6T3U4 1333 aa17.52■□□□□ 0.39
Nup54-201ENSMUST00000038514 Mtx1P47802 317 aa17.52■□□□□ 0.39
Nup54-201ENSMUST00000038514 Fam102bQ8BQS4 339 aa17.52■□□□□ 0.39
Nup54-201ENSMUST00000038514 Rrs1Q9CYH6 365 aaKnown RBP17.52■□□□□ 0.39
Nup54-201ENSMUST00000038514 Mrc1Q61830 1456 aa17.51■□□□□ 0.39
Nup54-201ENSMUST00000038514 Rgs12Q8CGE9 1381 aa17.51■□□□□ 0.39
Nup54-201ENSMUST00000038514 XpcP51612 930 aa17.51■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms