RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Cfap65Q3V0B4 1847 aa11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Cnga2Q62398 664 aa11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Prkab2Q6PAM0 271 aa11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Def6Q8C2K1 630 aa11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Chd1lQ9CXF7 900 aa11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Sil1Q9EPK6 465 aa11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Kiaa1210E9Q0C6 1637 aa11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 GmnnO88513 206 aa11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Snrpa1P57784 255 aaKnown RBP11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 RarsQ9D0I9 660 aaKnown RBP11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Pdzd9Q9D9M4 266 aa11.83□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 CalcaP70160 136 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Trim25Q61510 634 aaKnown RBP11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 DymQ8CHY3 669 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Syt10Q9R0N4 523 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Tpx2A2APB8 745 aaKnown RBP11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Slain2Q8CI08 581 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Gadd45bP22339 160 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Sass6Q80UK7 654 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Triml1Q8BVP1 470 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Rapgef3Q8VCC8 918 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Pcdhb22Q91XZ8 794 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Dydc2Q9D3X8 139 aa11.82□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ttc12Q8BW49 704 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ppp1r3fQ9JIG4 799 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Gm7347D3YYI9 267 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Speer4aF8VPX6 267 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Atf5O70191 283 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Cul5Q9D5V5 780 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Pkd2l2Q9JLG4 621 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Abcc12Q80WJ6 1366 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Gm12185Q5NCB2 835 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 MarsQ68FL6 902 aaKnown RBP11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Tmem119Q8R138 280 aa11.81□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Pet2A2AHY8 747 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ift88Q61371 824 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Jade2Q6ZQF7 829 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Olfm5Q8BU90 496 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Disp3A3KFU9 1347 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Mast3Q3U214 1321 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 TnksQ6PFX9 1320 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Tom1O88746 492 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Jakmip3Q5DTN8 844 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 CoilQ5SU73 570 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Rtn1Q8K0T0 780 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Plcd1Q8R3B1 756 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Med14A2ABV5 1459 aaKnown RBP11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Epb41l2O70318 988 aaKnown RBP11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Atp8a2P98200 1148 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ndufa8Q9DCJ5 172 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Cops6O88545 324 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Kank4Q6P9J5 1016 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ccdc82Q6PG04 518 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ccdc122Q8BVN0 290 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Krt79Q8VED5 531 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Terf2ipQ91VL8 393 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Mrpl12Q9DB15 201 aaKnown RBP11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Olr1Q9EQ09 363 aa11.8□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ccdc121E9Q6D3 323 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 TsksO54887 585 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Stx8O88983 236 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Nlrp1aQ2LKU9 1182 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Igf2bp2Q5SF07 592 aaKnown RBP11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Vps54Q5SPW0 977 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Emilin2Q8K482 1074 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ccar2Q8VDP4 922 aaKnown RBP11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Erbb4Q61527 1308 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Luc7l2Q7TNC4 392 aaKnown RBP11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ift74Q8BKE9 600 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Znf131Q8K3J5 619 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Tbc1d8Q9Z1A9 1134 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ddb1Q3U1J4 1140 aaKnown RBP11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Lrrc43Q3V0L5 667 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Zkscan4Q5SZT6 480 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ncapg2Q6DFV1 1138 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 TxlnaQ6PAM1 554 aaKnown RBP11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Appbp2Q9DAX9 585 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 FancaQ9JL70 1439 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Zbtb21E9Q444 1094 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Cep63Q3UPP8 700 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 St5Q924W7 1134 aa11.79□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Clec11aO88200 328 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 F2rP30558 430 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 FanccP50652 591 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Tubb4bP68372 445 aaKnown RBP11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Gtf3c5Q8R2T8 520 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Calml4Q91WQ9 153 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Vps16Q920Q4 839 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 CebpzP53569 1052 aaKnown RBP11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Zkscan8Q8BSL0 588 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Klf15Q9EPW2 415 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Gm28047Q3US59 414 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 IbspQ61711 324 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Klhl30Q8C3F7 581 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Igflr1Q3U4N7 345 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ufl1Q8CCJ3 793 aaKnown RBP11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Sugp2Q8CH09 1067 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Ccdc83Q9D4V3 305 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Nckap5lQ6GQX2 1323 aa11.78□□□□□ -0.52
Ccdc40-201ENSMUST00000035935 Zfyve16Q80U44 1528 aa11.77□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 54.9 ms