RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Lrit1Q8K099 624 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Mst1rQ62190 1378 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Sde2Q8K1J5 448 aaKnown RBP9.28□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Rps6ka4Q9Z2B9 773 aa9.28□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 1700029H14RikE9PY36 240 aa9.28□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Prl7d1P04769 244 aa9.28□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Asap2Q7SIG6 958 aa9.28□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Naa16Q9DBB4 864 aa9.28□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Sil1Q9EPK6 465 aa9.28□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Adgrb1Q3UHD1 1582 aa9.28□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Trpm3Q5F4S9 1721 aa9.28□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Pde8bE9Q4S1 865 aa9.27□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Me1P06801 572 aa9.27□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Kiaa0319Q5SZV5 1081 aa9.27□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 AbraQ8BUZ1 375 aa9.27□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Atp8a2P98200 1148 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Utp18Q5SSI6 552 aaKnown RBP9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Fsd2Q8BZ52 692 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Zbtb22Q9Z0G7 638 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Irs4Q9Z0Y7 1216 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Letm1Q9Z2I0 738 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Gli3Q61602 1583 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 NapbP28663 298 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Syt1P46096 421 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Cnnm3Q32NY4 713 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Polr3gQ6NXY9 223 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Rnf214Q8BFU3 668 aaKnown RBP9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Kdm3aQ6PCM1 1323 aa9.27□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Mapkapk5O54992 473 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Slurp2P0DP59 97 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Vps33bP59016 617 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Pkp1P97350 728 aaKnown RBP9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Mctp2Q5RJH2 878 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Sptlc3Q8BG54 563 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Slc4a1P04919 929 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Gadd45bP22339 160 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Nap1l3Q794H2 544 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Rufy3Q9D394 469 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Mcm4P49717 862 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 GalcP54818 684 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Arid3aQ62431 601 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ccdc66Q6NS45 935 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Bms1Q6PGF5 1284 aaKnown RBP9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Emilin1Q99K41 1017 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ccer1Q9CQL2 403 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Odf2lQ9D478 642 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Gja10Q9WUS4 505 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Foxo4Q9WVH3 505 aa9.26□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Plcb3P51432 1234 aaKnown RBP9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Jdp2P97875 163 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Kiaa0319lQ8K135 1048 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Prdm1Q60636 856 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Fchsd1Q6PFY1 688 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 RarsQ9D0I9 660 aaKnown RBP9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Trim44Q9QXA7 346 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Sos2Q02384 1333 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Celf1P28659 486 aaKnown RBP9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Rps8P62242 208 aaKnown RBP9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Hspd1P63038 573 aaKnown RBP9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Slc7a3P70423 618 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Plbd2Q3TCN2 594 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Pim2Q62070 370 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Sgsm2Q80U12 1005 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Cep55Q8BT07 462 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Cnot6lQ8VEG6 555 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ciao1Q99KN2 339 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Akt1s1Q9D1F4 257 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Stx6Q9JKK1 255 aa9.25□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Zbtb7aO88939 569 aaKnown RBP9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Fam83bQ0VBM2 1012 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Mrpl50Q8VDT9 159 aaKnown RBP9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 StrbpQ91WM1 672 aaKnown RBP9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ttc14Q9CSP9 761 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Izumo3A6PWV3 263 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Dok7Q18PE0 504 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Myl10Q62082 202 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Znf428Q8C1M2 176 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Hmg20bQ9Z104 317 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 MetP16056 1379 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Slc4a4O88343 1079 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 TbcaP48428 108 aaKnown RBP9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Cdcp1Q5U462 833 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ddx19aQ61655 478 aaKnown RBP9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Abtb2Q7TQI7 1024 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 R3hcc1Q8BSI6 488 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Plcd4Q8K3R3 807 aa9.24□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Arhgap33Q80YF9 1305 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Prr29B1ARI9 187 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Vwa3bJ9JI28 736 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Kifc2O08672 792 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ms4a2P20490 235 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Gm21985Q6P6P5 1106 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Ift57Q8BXG3 429 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Mb21d2Q8C525 428 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 ImmtQ8CAQ8 757 aaKnown RBP9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 NaspQ99MD9 773 aaKnown RBP9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Appbp2Q9DAX9 585 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Cyp3a57D3YYZ0 503 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Znf496Q5SXI5 585 aa9.23□□□□□ -0.93
Ccdc39-201ENSMUST00000029222 Rps6kb1Q8BSK8 525 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms