RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Odf2lQ9D478 642 aa13.38□□□□□ -0.27
Herc4-201ENSMUST00000020258 1700113H08RikE9Q9Q5 327 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Srek1Q8BZX4 494 aaKnown RBP13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Hmg20bQ9Z104 317 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Wdr17E9Q271 1322 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 AdgbG3UZ78 1657 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Atp2b1G5E829 1220 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Eef2kO08796 724 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 CebpaP53566 359 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Terf2ipQ91VL8 393 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 StrbpQ91WM1 672 aaKnown RBP13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Stxbp4Q9WV89 557 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ncbp1Q3UYV9 790 aaKnown RBP13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Dusp9Q7TNL7 452 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 CerkQ8K4Q7 531 aa13.37□□□□□ -0.27
Herc4-201ENSMUST00000020258 Tpm3P21107 285 aaKnown RBP13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Cep135Q6P5D4 1140 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Add3Q9QYB5 706 aaKnown RBP13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Syde2E9PUP1 1314 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ces1hD3Z298 562 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Lins1Q3U1D0 764 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Pram1Q6BCL1 675 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Zfp251Q6PCX8 632 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Kcnf1Q7TSH7 493 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Zfp317Q8C0Q5 607 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 AglF8VPN4 1532 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Gm29094F6Q785 221 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Stx1aO35526 288 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ccnl1Q52KE7 532 aaKnown RBP13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Cnot6lQ8VEG6 555 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 MthfsQ9D110 203 aa13.36□□□□□ -0.27
Herc4-201ENSMUST00000020258 Hps3Q91VB4 1002 aa13.35□□□□□ -0.27
Herc4-201ENSMUST00000020258 TnksQ6PFX9 1320 aa13.35□□□□□ -0.27
Herc4-201ENSMUST00000020258 NefhP19246 1090 aa13.35□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ggt6Q6PDE7 497 aa13.35□□□□□ -0.27
Herc4-201ENSMUST00000020258 Cep120Q7TSG1 988 aa13.35□□□□□ -0.27
Herc4-201ENSMUST00000020258 Nip7Q9CXK8 180 aaKnown RBP13.35□□□□□ -0.27
Herc4-201ENSMUST00000020258 Dip2bQ3UH60 1574 aa13.35□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ano10Q8BH79 659 aa13.35□□□□□ -0.27
Herc4-201ENSMUST00000020258 Vps16Q920Q4 839 aa13.35□□□□□ -0.27
Herc4-201ENSMUST00000020258 Cps1Q8C196 1500 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Sipa1l1Q8C0T5 1782 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ehd2Q8BH64 543 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Mtmr3Q8K296 1196 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 CemipQ8BI06 1361 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Prl3d3A0A0M6L0J6 224 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Tpm3-rs7D3Z2H9 248 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Ccp110Q7TSH4 1004 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Dmrt2Q8BG36 561 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Tmc2Q8R4P4 888 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Bicdl1A0JNT9 577 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Cdc45Q9Z1X9 566 aa13.34□□□□□ -0.27
Herc4-201ENSMUST00000020258 Hspd1P63038 573 aaKnown RBP13.33□□□□□ -0.28
Herc4-201ENSMUST00000020258 Ccdc162pQ0VG85 912 aa13.33□□□□□ -0.28
Herc4-201ENSMUST00000020258 Frat2Q8K025 231 aa13.33□□□□□ -0.28
Herc4-201ENSMUST00000020258 Tubb6Q922F4 447 aa13.33□□□□□ -0.28
Herc4-201ENSMUST00000020258 Pik3ap1Q9EQ32 811 aa13.33□□□□□ -0.28
Herc4-201ENSMUST00000020258 Csrnp1P59054 583 aa13.33□□□□□ -0.28
Herc4-201ENSMUST00000020258 Pla2g4fQ50L41 855 aa13.33□□□□□ -0.28
Herc4-201ENSMUST00000020258 Vps18Q8R307 973 aa13.33□□□□□ -0.28
Herc4-201ENSMUST00000020258 Dhx30Q99PU8 1217 aaKnown RBP13.33□□□□□ -0.28
Herc4-201ENSMUST00000020258 TbcaP48428 108 aaKnown RBP13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Ankrd40Q5SUE8 363 aa13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 HellsQ60848 821 aa13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Lamb3Q61087 1168 aa13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Gtf3c5Q8R2T8 520 aa13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Ccdc94Q9D6J3 314 aa13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Clic4Q9QYB1 253 aa13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Pnpla7A2AJ88 1352 aa13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Acot9Q9R0X4 439 aaKnown RBP13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Msh6P54276 1358 aaKnown RBP13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Zkscan4Q5SZT6 480 aa13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Ccdc47Q9D024 483 aaKnown RBP13.32□□□□□ -0.28
Herc4-201ENSMUST00000020258 Znf541Q0GGX2 1363 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Tbc1d4Q8BYJ6 1307 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Sptlc2P97363 560 aaKnown RBP13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Cyp7a1Q64505 503 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Oxsr1Q6P9R2 527 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Zkscan8Q8BSL0 588 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Rps6ka5Q8C050 863 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Aox1O54754 1333 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Kif13aQ9EQW7 1749 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Gm21969J3QJZ1 289 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Metap2O08663 478 aaKnown RBP13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Otud6bQ8K2H2 294 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Eya2O08575 532 aa13.31□□□□□ -0.28
Herc4-201ENSMUST00000020258 Atp2b3Q0VF55 1220 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Mb21d2Q8C525 428 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Krt82Q99M74 516 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Pet2A2AHY8 747 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 NapbP28663 298 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Ccdc102aQ3TMW1 549 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Ubxn10Q8BG34 277 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Sec62Q8BU14 398 aaKnown RBP13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Osbpl5Q9ER64 874 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Acap3Q6NXL5 833 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Kcnk13Q8R1P5 405 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Fam213aQ9CYH2 218 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Elf2Q9JHC9 593 aa13.3□□□□□ -0.28
Herc4-201ENSMUST00000020258 Atp12aQ9Z1W8 1035 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms