RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 Abca3Q8R420 1704 aa13□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Cyp3a57D3YYZ0 503 aa13□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Kif20aP97329 887 aa13□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Atp2b3Q0VF55 1220 aa13□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Itga6Q61739 1091 aa13□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Rdm1Q9CQK3 281 aa13□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Sept12Q9D451 317 aa13□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Hmg20bQ9Z104 317 aa13□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Trip6Q9Z1Y4 480 aa13□□□□□ -0.33
Cfap54-201ENSMUST00000020200 FanccP50652 591 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Hand2Q61039 217 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Ccdc158Q8CDI6 1109 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Klc3Q91W40 508 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Zbtb22Q9Z0G7 638 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Fer1l6E0CZ42 1862 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Cyp2c23E9Q5K4 494 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 PtmaP26350 111 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Ccdc66Q6NS45 935 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Sptlc3Q8BG54 563 aa12.99□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Cyp2d34L7N463 504 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Me3Q8BMF3 604 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Q8BT18 775 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Gtf2a1Q99PM3 378 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 FosbP13346 338 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Atp8a2P98200 1148 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Map10Q8BJS7 891 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Popdc2Q9ES82 367 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Nwd2Q6P5U7 1742 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Arap2Q8BZ05 1703 aa12.98□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Npc1l1Q6T3U4 1333 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Hspa1lP16627 641 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Edrf1Q6GQV7 1239 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 AidaQ8C4Q6 305 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Shisa4Q8CA71 197 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Emilin1Q99K41 1017 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Trim34bJ3QNR8 485 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Cd22P35329 862 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Ifit1bl2Q3U687 466 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Wdr93Q402B2 695 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Rnf214Q8BFU3 668 aaKnown RBP12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Sgsm1Q8BPQ7 1093 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Tmem67Q8BR76 992 aa12.97□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Lrp6O88572 1613 aa12.96□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Stat1P42225 749 aa12.96□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Nlrp9aQ66X03 949 aa12.96□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Spty2d1Q68FG3 682 aa12.96□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Isy1Q69ZQ2 285 aaKnown RBP12.96□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Iffo2Q8R2V2 512 aa12.96□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Gripap1Q8VD04 806 aa12.96□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Ankrd31A0A140LI88 1765 aa12.96□□□□□ -0.33
Cfap54-201ENSMUST00000020200 Pde8bE9Q4S1 865 aa12.96□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Fkbp1aP26883 108 aaKnown RBP12.96□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Cct2P80314 535 aaKnown RBP12.96□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Trim34aQ99PP6 485 aa12.96□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Tbc1d7Q9D0K0 293 aa12.96□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Greb1lB9EJV3 1913 aa12.96□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Cyp2d9P11714 504 aa12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Samm50Q8BGH2 469 aa12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Zfp113Q8C689 439 aa12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Bloc1s2Q9CWG9 143 aa12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Kat6bQ8BRB7 1872 aa12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Kif4P33174 1231 aa12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Slc38a10Q5I012 1090 aa12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Mctp2Q5RJH2 878 aa12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Slc5a4bQ91ZP4 660 aa12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Rbm33Q9CXK9 1231 aaKnown RBP12.95□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Pcmtd1P59913 357 aa12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Gm21985Q6P6P5 1106 aa12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Ppil4Q9CXG3 492 aaKnown RBP12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Usp42B2RQC2 1324 aaKnown RBP12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Sept1P42209 366 aa12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 CgnP59242 1191 aa12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Plekhf1Q3TB82 279 aa12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Leo1Q5XJE5 667 aa12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Ppp1r10Q80W00 888 aaKnown RBP12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 NaspQ99MD9 773 aaKnown RBP12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 NgdnQ9DB96 315 aaKnown RBP12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Kcnq5Q9JK45 933 aa12.94□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Kndc1Q0KK55 1742 aa12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Exosc10P56960 887 aaKnown RBP12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Nxf7Q80SZ6 620 aaKnown RBP12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Fam160b2Q80YR2 744 aa12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Lmod1Q8BVA4 595 aa12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Ccdc178Q8CDV0 866 aa12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Pms1Q8K119 917 aa12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 ZwintQ9CQU5 252 aa12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Kdm3aQ6PCM1 1323 aa12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Cnnm3Q32NY4 713 aa12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Pes1Q9EQ61 584 aaKnown RBP12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Mapk8ip1Q9WVI9 707 aa12.93□□□□□ -0.34
Cfap54-201ENSMUST00000020200 GakQ99KY4 1305 aa12.92□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Ifit1Q64282 463 aa12.92□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Pram1Q6BCL1 675 aa12.92□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Ift57Q8BXG3 429 aa12.92□□□□□ -0.34
Cfap54-201ENSMUST00000020200 E4f1Q8CCE9 783 aa12.92□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Cep57l1Q8VDS7 400 aa12.92□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Appbp2Q9DAX9 585 aa12.92□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Fbxl16A2RT62 479 aa12.91□□□□□ -0.34
Cfap54-201ENSMUST00000020200 TrhQ62361 256 aa12.91□□□□□ -0.34
Cfap54-201ENSMUST00000020200 Plekho1Q9JIY0 408 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms