RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PDLIM7Q9NR12 457 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 AK3Q9UIJ7 227 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 MBD1Q9UIS9 605 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 DKKL1Q9UK85 242 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 COLEC10Q9Y6Z7 277 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 PRAMEF27A3QJZ7 478 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 TUSC2O75896 110 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 ST6GAL1P15907 406 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 OR1Q1Q15612 314 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 AWAT1Q58HT5 328 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 PRAMEF9Q5VWM5 478 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 NUDCD2Q8WVJ2 157 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 PGAM5Q96HS1 289 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 CYSLTR2Q9NS75 346 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 KDM4EB2RXH2 506 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 ATF1P18846 271 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 KLK2P20151 261 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 CLDN10P78369 228 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 MEP1BQ16820 701 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM64Q6YI46 380 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 INSM2Q96T92 566 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 RAB33BQ9H082 229 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 A8MXE2 369 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 SMAD6O43541 496 aaKnown RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 HTR1FP30939 366 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 GABRA4P48169 554 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 CRYBB1P53674 252 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 HABP2Q14520 560 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 MARVELD1Q9BSK0 173 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 OR8D2Q9GZM6 311 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 B4DGG1 531 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 PHF1O43189 567 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF30P17039 623 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 HOXA9P31269 272 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 ADRA1AP35348 466 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 PDX1P52945 283 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 PPIAP62937 165 aaKnown RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 PLA1AQ53H76 456 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 TPRA1Q86W33 373 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 NEIL2Q969S2 332 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 NAA11Q9BSU3 229 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 FAM234AQ9H0X4 552 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 AFDNP55196 1824 aaKnown RBP4.63□□□□□ -1.67
VPS13D-214ENST00000620676 MASP2O00187 686 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 P2RX6O15547 441 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 FCMRO60667 390 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 CST7O76096 145 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 SULT1A1P50225 295 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 NKAIN4Q8IVV8 208 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 RCBTB1Q8NDN9 531 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 FKBP11Q9NYL4 201 aa4.63□□□□□ -1.67
VPS13D-214ENST00000620676 MN1Q10571 1320 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 LOC100289279A0A1B0GTE1 492 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 DNASE2O00115 360 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 DPM1O60762 260 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 RDH16O75452 317 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 SCGB2A1O75556 95 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ADRA2CP18825 462 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ALOX5APP20292 161 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PSMB5P28074 263 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TAS2R31P59538 309 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 HMGCLL1Q8TB92 370 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF775Q96BV0 537 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TIFAQ96CG3 184 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 OR2J2O76002 312 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TAS2R20P59543 309 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 CNKSR3Q6P9H4 555 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 C19orf47Q8N9M1 422 aaKnown RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 OR52D1Q9H346 318 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 POPDC3Q9HBV1 291 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 EMC9Q9Y3B6 208 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 POMT1Q9Y6A1 747 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 KNL1Q8NG31 2342 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PDGFBP01127 241 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TRGC2P03986 189 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 CD37P11049 281 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 NUMA1Q14980 2115 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 GFI1BQ5VTD9 330 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PHYKPLQ8IUZ5 450 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TTC9BQ8N6N2 239 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 SGIP1Q9BQI5 828 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 HMX1Q9NP08 348 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 GLRA1P23415 457 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 IGFBP6P24592 240 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 HACD4Q5VWC8 232 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 RPL22L1Q6P5R6 122 aaKnown RBP4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PLXDC2Q6UX71 529 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 USP53Q70EK8 1073 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 CMTM8Q8IZV2 173 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 STT3BQ8TCJ2 826 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 VN1R17PQ8TDU5 208 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 ZFP64Q9NPA5 681 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PPP5D1E7EU14 171 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 CTSEP14091 401 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 SCGB2A2Q13296 93 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 DEFB134Q4QY38 66 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 TTC9Q92623 222 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 LDAHQ9H6V9 325 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 WIF1Q9Y5W5 379 aa4.62□□□□□ -1.67
VPS13D-214ENST00000620676 PIK3C2BO00750 1634 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms