RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 SPATA24Q86W54 205 aa14.5□□□□□ -0.09
CBWD3-211ENST00000615061 TGIF2LYQ8IUE0 185 aa14.5□□□□□ -0.09
CBWD3-211ENST00000615061 AQP12AQ8IXF9 295 aa14.5□□□□□ -0.09
CBWD3-211ENST00000615061 FOXN4Q96NZ1 517 aa14.5□□□□□ -0.09
CBWD3-211ENST00000615061 TRIM15Q9C019 465 aa14.5□□□□□ -0.09
CBWD3-211ENST00000615061 MOV10Q9HCE1 1003 aaKnown RBP14.5□□□□□ -0.09
CBWD3-211ENST00000615061 CA10Q9NS85 328 aa14.5□□□□□ -0.09
CBWD3-211ENST00000615061 FAIMQ9NVQ4 179 aa14.5□□□□□ -0.09
CBWD3-211ENST00000615061 SLC22A23A1A5C7 686 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 RAB36O95755 333 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 SDHAP31040 664 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 ATP5J2P56134 94 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 SGCAQ16586 387 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 AGAP6Q5VW22 663 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 ZNF770Q6IQ21 691 aaPredicted RBP14.49□□□□□ -0.09
CBWD3-211ENST00000615061 PTCHD4Q6ZW05 846 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 FBXL14Q8N1E6 418 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 SAMD8Q96LT4 415 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 DENND2DQ9H6A0 471 aaPredicted RBP14.49□□□□□ -0.09
CBWD3-211ENST00000615061 SIAEQ9HAT2 523 aa14.49□□□□□ -0.09
CBWD3-211ENST00000615061 SAMHD1Q9Y3Z3 626 aaKnown RBP14.49□□□□□ -0.09
CBWD3-211ENST00000615061 PRSS37A4D1T9 235 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 XKRYO14609 159 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 GASTP01350 101 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 IFNGR2P38484 337 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 MRPS34P82930 218 aaKnown RBP14.48□□□□□ -0.09
CBWD3-211ENST00000615061 TSPAN31Q12999 210 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 RFX4Q33E94 735 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 OTPQ5XKR4 325 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 KRT80Q6KB66 452 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 ZNF544Q6NX49 715 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 DPY19L2P2Q6ZN68 376 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 GNPDA2Q8TDQ7 276 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 NDEL1Q9GZM8 345 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 SYT4Q9H2B2 425 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 EGLN3Q9H6Z9 239 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 REEP1Q9H902 201 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 RNF121Q9H920 327 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 CBLN4Q9NTU7 201 aa14.48□□□□□ -0.09
CBWD3-211ENST00000615061 GDF2Q9UK05 429 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-211ENST00000615061 A0A1W2PPL8 197 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 CCNB2O95067 398 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 SCG5P05408 212 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 MMP7P09237 267 aaPredicted RBP14.47□□□□□ -0.09
CBWD3-211ENST00000615061 NR2C1P13056 603 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 CCL2P13500 99 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 PAX1P15863 534 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 CTLA4P16410 223 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 APOBEC3AP31941 199 aaPredicted RBP14.47□□□□□ -0.09
CBWD3-211ENST00000615061 CDKN2AP42771 156 aaKnown RBP14.47□□□□□ -0.09
CBWD3-211ENST00000615061 NRN1LQ496H8 165 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 ZNF620Q6ZNG0 422 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 YTHDF3Q7Z739 585 aaKnown RBP14.47□□□□□ -0.09
CBWD3-211ENST00000615061 AQP11Q8NBQ7 271 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 FBXO17Q96EF6 278 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 ERMAPQ96PL5 475 aaPredicted RBP14.47□□□□□ -0.09
CBWD3-211ENST00000615061 CACNG6Q9BXT2 260 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 TCRBV3S1A0A5B6 114 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 CST1P01037 141 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 SERPINA5P05154 406 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 IGFBP1P08833 259 aaPredicted RBP14.47□□□□□ -0.09
CBWD3-211ENST00000615061 ZNF35P13682 527 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 LAP3P28838 519 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 RPS6KA3P51812 740 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 MST1LQ2TV78 715 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 SLC36A2Q495M3 483 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 CLEC12AQ5QGZ9 265 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 SHEQ5VZ18 495 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 GPR139Q6DWJ6 353 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 TMEM179BQ7Z7N9 219 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 FNDC8Q8TC99 324 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 TSSK2Q96PF2 358 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 TMUB1Q9BVT8 246 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 IFT27Q9BW83 186 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 PLA2G12AQ9BZM1 189 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 GRIP2Q9C0E4 1043 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 RERGLQ9H628 205 aa14.47□□□□□ -0.09
CBWD3-211ENST00000615061 CHD3Q12873 2000 aaKnown RBP14.46□□□□□ -0.09
CBWD3-211ENST00000615061 MGRN1O60291 552 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 TMCC2O75069 709 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 TXNDC12O95881 172 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 IGHV4-39P01824 125 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 ZNF32P17041 273 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 NPR2P20594 1047 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 SLC6A6P31641 620 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 THBS4P35443 961 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 SNTB2Q13425 540 aaKnown RBP14.46□□□□□ -0.09
CBWD3-211ENST00000615061 ADIPOQQ15848 244 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 MSMPQ1L6U9 139 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 MICAQ29983 383 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 UGT2A3Q6UWM9 527 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 FOXL2NBQ6ZUU3 175 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 PAQR4Q8N4S7 273 aaPredicted RBP14.46□□□□□ -0.09
CBWD3-211ENST00000615061 NUP37Q8NFH4 326 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 OR4F15Q8NGB8 312 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 POP5Q969H6 163 aaKnown RBP14.46□□□□□ -0.09
CBWD3-211ENST00000615061 SLCO4A1Q96BD0 722 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 Q96MF0 132 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 EMC7Q9NPA0 242 aa14.46□□□□□ -0.09
CBWD3-211ENST00000615061 NIPBLQ6KC79 2804 aaeCLIP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms