RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 CGGBP1Q9UFW8 167 aaPredicted RBP9.98□□□□□ -0.81
CDC42EP3-206ENST00000611976 SIGLEC7Q9Y286 467 aa9.98□□□□□ -0.81
CDC42EP3-206ENST00000611976 GOLGB1Q14789 3259 aaKnown RBP9.98□□□□□ -0.81
CDC42EP3-206ENST00000611976 XRCC3O43542 346 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 MGMTP16455 207 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 CNR1P21554 472 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 PXNP49023 591 aaPredicted RBP9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 ATP1B3P54709 279 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 RUNX2Q13950 521 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 AADACL4Q5VUY2 407 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR5M10Q6IEU7 315 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 LINC00346Q8IVM7 164 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR1S1Q8NH92 325 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 DERL3Q96Q80 235 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 CMSS1Q9BQ75 279 aaKnown RBP9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 ZMAT3Q9HA38 289 aaKnown RBP9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 SUSD2Q9UGT4 822 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 TLCD2A6NGC4 264 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 ATF1P18846 271 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 ZP3P21754 424 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 CD38P28907 300 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 DCTDP32321 178 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 EFNA3P52797 238 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 EBPQ15125 230 aaKnown RBP9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 CDKN3Q16667 212 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 EXOSC6Q5RKV6 272 aaKnown RBP9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 FAAP20Q6NZ36 180 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 LIX1LQ8IVB5 337 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR14L1PQ8NHC6 308 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 SLAMF7Q9NQ25 335 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 FFAR1O14842 300 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 ZNF749O43361 778 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 PMP2P02689 132 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 CEACAM5P06731 702 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 CPT2P23786 658 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 SLC6A1P30531 599 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 BIDP55957 195 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 CCDC71Q8IV32 467 aaPredicted RBP9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 ARIH2OSQ8N7S6 290 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 MRGPRX3Q96LB0 322 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 NUDT22Q9BRQ3 303 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 MIXL1Q9H2W2 232 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 SLC17A4Q9Y2C5 497 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 LOC107986453A0A1B0GWG9 222 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 RAB19A4D1S5 217 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 IMPA2O14732 288 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 SGCEO43556 437 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 EMDP50402 254 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 PPT1P50897 306 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 LINC00303Q3SY05 128 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 SLC36A2Q495M3 483 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 LHX8Q68G74 356 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 MARCH3Q86UD3 253 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 RSPRY1Q96DX4 576 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 LAT2Q9GZY6 243 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 SMCO4Q9NRQ5 59 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 LRIT1Q9P2V4 623 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 PTPRFP10586 1907 aa9.97□□□□□ -0.81
CDC42EP3-206ENST00000611976 SERPINE2P07093 398 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR4E1P0C645 316 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 RPL23AP62750 156 aaKnown RBP9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 RPL18Q07020 188 aaKnown RBP9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 AGBL4Q5VU57 503 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 SHISA6Q6ZSJ9 500 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 FJX1Q86VR8 437 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 SLC37A2Q8TED4 501 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 SLC6A18Q96N87 628 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 MAP3K3Q99759 626 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 BARHL1Q9BZE3 327 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 LDAHQ9H6V9 325 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 CD207Q9UJ71 328 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 ZNF346Q9UL40 294 aaKnown RBP9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 RPH3AQ9Y2J0 694 aaPredicted RBP9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 COA3Q9Y2R0 106 aaPredicted RBP9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 HRH3Q9Y5N1 445 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 A0A0B4J2E0 115 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 A0A1B0GX12 115 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 OR5H14A6NHG9 310 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 FCGR2AP12318 317 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 TBPP20226 339 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 BLVRBP30043 206 aaPredicted RBP9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 SRPXP78539 464 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 JAM3Q9BX67 310 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 KCNIP1Q9NZI2 227 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 KLK11Q9UBX7 282 aa9.96□□□□□ -0.81
CDC42EP3-206ENST00000611976 PRAMEF27A3QJZ7 478 aa9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 LINC01553A4QN01 128 aa9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 PPM1DO15297 605 aa9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 SEMG1P04279 462 aa9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 HOXB9P17482 250 aaPredicted RBP9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 NME2P22392 152 aa9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 GABREP78334 506 aa9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 ELAVL1Q15717 326 aaKnown RBP9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 C2orf76Q3KRA6 126 aa9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 PRAMEF9Q5VWM5 478 aa9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 H1FNTQ75WM6 255 aaPredicted RBP9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 ZBTB44Q8NCP5 570 aa9.96□□□□□ -0.82
CDC42EP3-206ENST00000611976 OR4C16Q8NGL9 310 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms