RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 CDAP32320 146 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 KDELR2P33947 212 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 GUCA1AP43080 201 aaPredicted RBP8.39□□□□□ -1.07
VRK3-216ENST00000599342 MAGEB1P43366 347 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 UCP2P55851 309 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 ERVS71-1P61550 626 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 CCL8P80075 99 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 MRPS34P82930 218 aaKnown RBP8.39□□□□□ -1.07
VRK3-216ENST00000599342 SRSF2Q01130 221 aaKnown RBP8.39□□□□□ -1.07
VRK3-216ENST00000599342 TEKQ02763 1124 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 TAF11Q15544 211 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 PABPC1L2AQ5JQF8 200 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 C10orf128Q5T292 105 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 ARMC4Q5T2S8 1044 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 UNQ6126/PRO20091Q6UXV3 157 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 MICU2Q8IYU8 434 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 RFLNBQ8N5W9 214 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 OR1J1Q8NGS3 322 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 OR51F2Q8NH61 342 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 MOSPD2Q8NHP6 518 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 CLDND2Q8NHS1 167 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 FNDC8Q8TC99 324 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 LIPHQ8WWY8 451 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 NSMAFQ92636 917 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 HDAC2Q92769 488 aaKnown RBP8.39□□□□□ -1.07
VRK3-216ENST00000599342 YIPF5Q969M3 257 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 C1orf159Q96HA4 380 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 PRRC1Q96M27 445 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 ZNF583Q96ND8 569 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 TSPAN32Q96QS1 320 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 TXNIPQ9H3M7 391 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 SIAEQ9HAT2 523 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 SMURF2Q9HAU4 748 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 HINT3Q9NQE9 182 aaKnown RBP8.39□□□□□ -1.07
VRK3-216ENST00000599342 SAR1AQ9NR31 198 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 DECR2Q9NUI1 292 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 EIF3KQ9UBQ5 218 aaKnown RBP8.39□□□□□ -1.07
VRK3-216ENST00000599342 GRIP1Q9Y3R0 1128 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 CAPN7Q9Y6W3 813 aa8.39□□□□□ -1.07
VRK3-216ENST00000599342 MALRD1Q5VYJ5 2156 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 IGLV3-9A0A075B6K5 115 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 ELOVL7A1L3X0 281 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 HTR3EA5X5Y0 456 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 HAX1O00165 279 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 PIP5K1CO60331 668 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 CDC14BO60729 498 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 SASH3O75995 380 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 MSMBP08118 114 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 MMP7P09237 267 aaPredicted RBP8.38□□□□□ -1.07
VRK3-216ENST00000599342 GAAP10253 952 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 IFI30P13284 250 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 ZNF32P17041 273 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 STOMP27105 288 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 GCH1P30793 250 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 ZNF133P52736 654 aaPredicted RBP8.38□□□□□ -1.07
VRK3-216ENST00000599342 SELENOWP63302 87 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 GLO1Q04760 184 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 FMODQ06828 376 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 SCGB2A2Q13296 93 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 LAPTM4AQ15012 233 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 SGCAQ16586 387 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 FAM205BPQ63HN1 556 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 SHQ1Q6PI26 577 aaKnown RBP8.38□□□□□ -1.07
VRK3-216ENST00000599342 ARPINQ7Z6K5 226 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 TMEM186Q96B77 213 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 BPIFA2Q96DR5 249 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 RBP7Q96R05 134 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 ALG12Q9BV10 488 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 FNDC11Q9BVV2 318 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 LPAR2Q9HBW0 351 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 HIF1ANQ9NWT6 349 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 HIF3AQ9Y2N7 669 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 AP3M1Q9Y2T2 418 aa8.38□□□□□ -1.07
VRK3-216ENST00000599342 IGHV1-69-2A0A0G2JMI3 117 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 A0A1W2PPL8 197 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 PLSCR5A0PG75 271 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 C5orf49A4QMS7 147 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 A6NIZ1 184 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 CLDN25C9JDP6 229 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 GSTA4O15217 222 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 SLC22A2O15244 555 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 RP2O75695 350 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 IGHMP01871 453 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 IFNW1P05000 195 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 TSPAN19P0C672 248 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 ANPEPP15144 967 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 GDI2P50395 445 aaKnown RBP8.37□□□□□ -1.07
VRK3-216ENST00000599342 CTXN1P60606 82 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 RAP1BP61224 184 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 RPL27P61353 136 aaKnown RBP8.37□□□□□ -1.07
VRK3-216ENST00000599342 PCBD1P61457 104 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 RAP1AP62834 184 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 ERVK-25P63136 954 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 ZNF718Q3SXZ3 478 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 THEM4Q5T1C6 240 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 ALDH16A1Q8IZ83 802 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 CPEB3Q8NE35 698 aaKnown RBP8.37□□□□□ -1.07
VRK3-216ENST00000599342 GEMIN6Q8WXD5 167 aaKnown RBP8.37□□□□□ -1.07
VRK3-216ENST00000599342 NABP1Q96AH0 204 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 RCN3Q96D15 328 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms