RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MGRN1O60291 552 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 OR6A2O95222 327 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 RAB36O95755 333 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 SERPINA1P01009 418 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 HPXP02790 462 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 ASAH2BP0C7U1 165 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 OR8G3PP0DMU2 310 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 LYNX1P0DP58 116 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 PCMT1P22061 227 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 ACHEP22303 614 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 COL8A2P25067 703 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 CSNK1A1P48729 337 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 TAS2R41P59536 307 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 RPS23P62266 143 aaKnown RBP8.92□□□□□ -0.98
VPS4B-207ENST00000591519 RAB39AQ14964 217 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 TRIP10Q15642 601 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 HIST3H3Q16695 136 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 TTC33Q6PID6 262 aaPredicted RBP8.92□□□□□ -0.98
VPS4B-207ENST00000591519 SLC35D2Q76EJ3 337 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 DPPA2Q7Z7J5 298 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 SLC22A24Q8N4F4 322 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 RBM15BQ8NDT2 890 aaKnown RBP8.92□□□□□ -0.98
VPS4B-207ENST00000591519 FGFBP3Q8TAT2 258 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 ADAMTS16Q8TE57 1224 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 RASSF5Q8WWW0 418 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 RDH5Q92781 318 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 CDRT15Q96T59 188 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 TPK1Q9H3S4 243 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 NANSQ9NR45 359 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 ABCD2Q9UBJ2 740 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 SLC7A8Q9UHI5 535 aa8.92□□□□□ -0.98
VPS4B-207ENST00000591519 SLC22A23A1A5C7 686 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 TRAPPC13A5PLN9 417 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 CENPBD1B2RD01 187 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 C11orf98E9PRG8 122 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 DHHO43323 396 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 TCF21O43680 179 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 GMNNO75496 209 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 CH25HO95992 272 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 PATE4P0C8F1 98 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 ZNF250P15622 560 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 ZNF133P52736 654 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-207ENST00000591519 SELENOWP63302 87 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 SRSF2Q01130 221 aaKnown RBP8.91□□□□□ -0.98
VPS4B-207ENST00000591519 GALK2Q01415 458 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 PIN1Q13526 163 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-207ENST00000591519 GLYATQ6IB77 296 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 C16orf89Q6UX73 402 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 RINLQ6ZS11 566 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 FKBP9P1Q75LS8 142 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 LRP11Q86VZ4 500 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 PGAM4Q8N0Y7 254 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 LRRC17Q8N6Y2 441 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 LZICQ8WZA0 190 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 ZNF566Q969W8 418 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 SEPHS2Q99611 448 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 SYT3Q9BQG1 590 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 PRSS27Q9BQR3 290 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 MRPL13Q9BYD1 178 aaKnown RBP8.91□□□□□ -0.98
VPS4B-207ENST00000591519 TMEM38BQ9NVV0 291 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 NKIRAS2Q9NYR9 191 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 MYEF2Q9P2K5 600 aaKnown RBP8.91□□□□□ -0.98
VPS4B-207ENST00000591519 RHCGQ9UBD6 479 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 ZNF229Q9UJW7 825 aa8.91□□□□□ -0.98
VPS4B-207ENST00000591519 ZNF346Q9UL40 294 aaKnown RBP8.91□□□□□ -0.98
VPS4B-207ENST00000591519 IGLV3-9A0A075B6K5 115 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 A0A0A6YYJ9 748 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 J3KTA2 159 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 RP2O75695 350 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 SERPINI2O75830 405 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 FARS2O95363 451 aaKnown RBP8.9□□□□□ -0.98
VPS4B-207ENST00000591519 SNAP29O95721 258 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 IGF2P01344 180 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 TFP02787 698 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 HIST1H2ABP04908 130 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 QDPRP09417 244 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 TSPAN19P0C672 248 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 PGA4P0DJD7 388 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 PGA3P0DJD8 388 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 ALDH3B1P43353 468 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 GPR6P46095 362 aaPredicted RBP8.9□□□□□ -0.98
VPS4B-207ENST00000591519 LMO4P61968 165 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 KRT72Q14CN4 511 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 SAMD4BQ5PRF9 694 aaKnown RBP8.9□□□□□ -0.98
VPS4B-207ENST00000591519 SHISA2Q6UWI4 295 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 HIST3H2AQ7L7L0 130 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 NKAIN4Q8IVV8 208 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 CLDND2Q8NHS1 167 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 TMEM255BQ8WV15 326 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 LIPHQ8WWY8 451 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 HIST1H2ACQ93077 130 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 YIPF5Q969M3 257 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 C1orf198Q9H425 327 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 MEPEQ9NQ76 525 aaPredicted RBP8.9□□□□□ -0.98
VPS4B-207ENST00000591519 DUSP13Q9UII6 198 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 GPR160Q9UJ42 338 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 RIMS3Q9UJD0 308 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 SNX13Q9Y5W8 968 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 NBEAL1Q6ZS30 2694 aa8.9□□□□□ -0.98
VPS4B-207ENST00000591519 C17orf100A8MU93 164 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms