RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TNFSF11O14788 317 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 EIF1BO60739 113 aaKnown RBP18.19■□□□□ 0.5
ATG4D-204ENST00000586417 GAAP10253 952 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 GBX2P52951 348 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-204ENST00000586417 GFRA1P56159 465 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 CLDN20P56880 219 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 CDK5R1Q15078 307 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 OTPQ5XKR4 325 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 Q6ZS92 163 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 ADAD1Q96M93 576 aaKnown RBP18.19■□□□□ 0.5
ATG4D-204ENST00000586417 SFXN2Q96NB2 322 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 TTTY12Q9BZ98 90 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 MMP27Q9H306 513 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 SLC24A3Q9HC58 644 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 PSMD9O00233 223 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 DVL2O14641 736 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 TRAPPC6AO75865 159 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 ABHD16AO95870 558 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 CSNK2A1P68400 391 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-204ENST00000586417 SIRPAP78324 504 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 ZNF169Q14929 603 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-204ENST00000586417 RNFT1Q5M7Z0 435 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 DNM1P34Q6PK57 102 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 ZFP62Q8NB50 900 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-204ENST00000586417 OTOSQ8NHW6 89 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 RPS4Y2Q8TD47 263 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 SRXN1Q9BYN0 137 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 BARHL1Q9BZE3 327 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 MRM2Q9UI43 246 aaKnown RBP18.19■□□□□ 0.5
ATG4D-204ENST00000586417 KCNG2Q9UJ96 466 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 LAMP5Q9UJQ1 280 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 KIAA1549Q9HCM3 1950 aa18.19■□□□□ 0.5
ATG4D-204ENST00000586417 SLC35F4A4IF30 521 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 CD8B2A6NJW9 211 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 FAM166BA8MTA8 275 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 RGS9O75916 674 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-204ENST00000586417 CDRT1O95170 752 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 IL1AP01583 271 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 HLA-DQA2P01906 255 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 PGA4P0DJD7 388 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 PGA3P0DJD8 388 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 CD8BP10966 210 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 ZNF43P17038 809 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 AGFG1P52594 562 aaKnown RBP18.18■□□□□ 0.5
ATG4D-204ENST00000586417 GLO1Q04760 184 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 SLC3A1Q07837 685 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 PLEKHN1Q494U1 663 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-204ENST00000586417 EGFL6Q8IUX8 553 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 OR6X1Q8NH79 312 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 SMIM19Q96E16 107 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 SLC25A44Q96H78 314 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-204ENST00000586417 ADGRG7Q96K78 797 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 UCN2Q96RP3 112 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 AMELYQ99218 206 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 MED18Q9BUE0 208 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 AKIP1Q9NQ31 210 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 GALNT8Q9NY28 637 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 LUZP4Q9P127 313 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 B4GALT7Q9UBV7 327 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 ING1Q9UK53 422 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-204ENST00000586417 GSTK1Q9Y2Q3 226 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 TMEM14AQ9Y6G1 99 aa18.18■□□□□ 0.5
ATG4D-204ENST00000586417 IGHV3-15A0A0B4J1V0 119 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 ZNF593O00488 134 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-204ENST00000586417 DNPH1O43598 174 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 HPNP05981 417 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 OR8G3PP0DMU2 310 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 SDC2P34741 201 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 PSMB10P40306 273 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 POU4F3Q15319 338 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 MEP1BQ16820 701 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 CCDC58Q4VC31 144 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 RPL22L1Q6P5R6 122 aaKnown RBP18.17■□□□□ 0.5
ATG4D-204ENST00000586417 PLEKHG7Q6ZR37 379 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 KCTD20Q7Z5Y7 419 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 NOXO1Q8NFA2 376 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 SLC26A10Q8NG04 563 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 SNTG1Q9NSN8 517 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 B3GNT3Q9Y2A9 372 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 ZNF407Q9C0G0 2248 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 CENPBD1B2RD01 187 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 KHDRBS3O75525 346 aaKnown RBP18.17■□□□□ 0.5
ATG4D-204ENST00000586417 UPK3AO75631 287 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 SC5DO75845 299 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 GLSO94925 669 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-204ENST00000586417 MPZL1O95297 269 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 IGHG1P01857 330 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 CD1AP06126 327 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 CELA3AP09093 270 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 CLEC2LP0C7M8 214 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 SOX6P35712 828 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 MAGEA5P43359 124 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 TGM4P49221 684 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 RAC3P60763 192 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 PLGLB1Q02325 96 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 EGR3Q06889 387 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 CAMK2DQ13557 499 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 DCTN2Q13561 401 aaKnown RBP18.17■□□□□ 0.5
ATG4D-204ENST00000586417 TRAM1Q15629 374 aa18.17■□□□□ 0.5
ATG4D-204ENST00000586417 HDDC2Q7Z4H3 204 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms