RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 ZNF716A6NP11 495 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 H7C417 338 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 DNPH1O43598 174 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 PIP5K1CO60331 668 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 PTP4A3O75365 173 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 MRPL33O75394 65 aaKnown RBP8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 SEC14L2O76054 403 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 SOX14O95416 240 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 PMS2P2O95744 297 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 F12P00748 615 aaPredicted RBP8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 FKBP2P26885 142 aaKnown RBP8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 APOBEC1P41238 236 aaKnown RBP8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 IDH2P48735 452 aaKnown RBP8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CDC42P60953 191 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 OCLNQ16625 522 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 B3GLCTQ6Y288 498 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 PTCHD4Q6ZW05 846 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 TMPRSS11FQ6ZWK6 438 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 RRM2BQ7LG56 351 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 GRINAQ7Z429 371 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 GPR141Q7Z602 305 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 NRMQ8IXM6 262 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ZNF440Q8IYI8 595 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ZNF525Q8N782 197 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CLDN22Q8N7P3 220 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 OR8D4Q8NGM9 314 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 TMEM239Q8WW34 195 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 HTRA1Q92743 480 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ZNF426Q9BUY5 554 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 SHARPINQ9H0F6 387 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 FKRPQ9H9S5 495 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 IL20Q9NYY1 176 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 MALT1Q9UDY8 824 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CHRNA9Q9UGM1 479 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 SLC35A3Q9Y2D2 325 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 HDGFL3Q9Y3E1 203 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ATP23Q9Y6H3 246 aa8.5□□□□□ -1.05
CDK5RAP3-227ENST00000583352 M0R129 80 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 RGS10O43665 173 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CHP2O43745 196 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 FAM20BO75063 409 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ENTPD6O75354 484 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 MT-ND2P03891 347 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ZNF16P17020 682 aaPredicted RBP8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 MAKP20794 623 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 USF1P22415 310 aaPredicted RBP8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 RBM34P42696 430 aaKnown RBP8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 SLC15A1P46059 708 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CLK1P49759 484 aaKnown RBP8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 EFNA4P52798 201 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 SLC16A1P53985 500 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 OR2B6P58173 313 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 EMX1Q04741 257 aaPredicted RBP8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 IRF3Q14653 427 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 RAB39AQ14964 217 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 GABRA6Q16445 453 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 PRSS48Q7RTY5 328 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 IQCF1Q8N6M8 205 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ZNF540Q8NDQ6 660 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 OR8J1Q8NGP2 316 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 OR13F1Q8NGS4 319 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 C10orf105Q8TEF2 133 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 MUL1Q969V5 352 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 FAM46AQ96IP4 442 aaKnown RBP8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 MPP4Q96JB8 637 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 C1QTNF6Q9BXI9 259 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 PLA2G12AQ9BZM1 189 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CCNB1IP1Q9NPC3 277 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 EXOSC3Q9NQT5 275 aaKnown RBP8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CLN6Q9NWW5 311 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 IMPAD1Q9NX62 359 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 TVP23BQ9NYZ1 205 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 UPB1Q9UBR1 384 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 AMDHD2Q9Y303 409 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 PMF1-BGLAPU3KQ54 211 aa8.49□□□□□ -1.05
CDK5RAP3-227ENST00000583352 A0A087WUJ7 227 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 UNC119BA6NIH7 251 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 H3BN98 237 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CDC42EP2O14613 210 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 PRKYO43930 277 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 LMX1BO60663 402 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 INMTO95050 263 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CDK1P06493 297 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ITGA5P08648 1049 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 IGHV4-31P0DP07 118 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CCNA2P20248 432 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 APOBEC3AP31941 199 aaPredicted RBP8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 MAP2K4P45985 399 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 HTR3AP46098 478 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 GZMKP49863 264 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 FOXG1P55316 489 aaPredicted RBP8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 TGFBR3Q03167 851 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 FHL1Q13642 323 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 NEDD8Q15843 81 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 C1QTNF12Q5T7M4 302 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ULK3Q6PHR2 472 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 CASP12Q6UXS9 341 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 ALDH16A1Q8IZ83 802 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 C17orf78Q8N4C9 275 aa8.48□□□□□ -1.05
CDK5RAP3-227ENST00000583352 TCEANCQ8N8B7 351 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms