RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 IGHV2OR16-5A0A0B4J2B6 119 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 A0A1W2PRG6 482 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 HTR3EA5X5Y0 456 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 GMNCA6NCL1 334 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 NME4O00746 187 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 DHHO43323 396 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 ENTPD5O75356 428 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 ZNF682O95780 498 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 QDPRP09417 244 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 PGA4P0DJD7 388 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 PGA3P0DJD8 388 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 OR8G3PP0DMU2 310 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 FPR2P25090 351 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 THBS4P35443 961 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 AQP2P41181 271 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 YAP1P46937 504 aaKnown RBP6.43□□□□□ -1.38
NUP88-205ENST00000572809 GSK3BP49841 420 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 SLC7A2P52569 658 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 CLRN1P58418 232 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 SNRPD2P62316 118 aaKnown RBP6.43□□□□□ -1.38
NUP88-205ENST00000572809 PPP2R2BQ00005 443 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 RPL18Q07020 188 aaKnown RBP6.43□□□□□ -1.38
NUP88-205ENST00000572809 DAG1Q14118 895 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 MELKQ14680 651 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 ADIPOQQ15848 244 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 HIST3H3Q16695 136 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 C8orf82Q6P1X6 216 aaPredicted RBP6.43□□□□□ -1.38
NUP88-205ENST00000572809 CLEC2AQ6UVW9 174 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 HACD2Q6Y1H2 254 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 MYPOPQ86VE0 399 aaPredicted RBP6.43□□□□□ -1.38
NUP88-205ENST00000572809 SKA3Q8IX90 412 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 SLC22A24Q8N4F4 322 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 NUP37Q8NFH4 326 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 MCHR2Q969V1 340 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 ZNF75AQ96N20 296 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 VRK1Q99986 396 aaPredicted RBP6.43□□□□□ -1.38
NUP88-205ENST00000572809 FNDC11Q9BVV2 318 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 MYLK2Q9H1R3 596 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 EMC7Q9NPA0 242 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 INIPQ9NRY2 104 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 C20orf141Q9NUB4 165 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 FBXO9Q9UK97 447 aaPredicted RBP6.43□□□□□ -1.38
NUP88-205ENST00000572809 A4GNTQ9UNA3 340 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 SNX13Q9Y5W8 968 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 ZFHX3Q15911 3703 aa6.43□□□□□ -1.38
NUP88-205ENST00000572809 NIPBLQ6KC79 2804 aaeCLIP6.42□□□□□ -1.38
NUP88-205ENST00000572809 IGHV4-30-2A0A087WSY4 118 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 SH3PXD2BA1X283 911 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 INAFM1C9JVW0 142 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 MCIDASD6RGH6 385 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 J3KTA2 159 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 ZNF561-AS1K7EIQ3 104 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 SNX3O60493 162 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 TRMUO75648 421 aaKnown RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 PDE5AO76074 875 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 LY6HO94772 140 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 UBL3O95164 117 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 RAB36O95755 333 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 SERPINA1P01009 418 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 IGHG1P01857 330 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 IFNW1P05000 195 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 TSPAN19P0C672 248 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 PATE4P0C8F1 98 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 IFI30P13284 250 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 B4GALT1P15291 398 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 ACADSP16219 412 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 ZNF14P17017 642 aaPredicted RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 NPR2P20594 1047 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 FUT4P22083 530 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 NR4A1P22736 598 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 PCSK6P29122 969 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 PRDX6P30041 224 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 PTDSS1P48651 473 aaKnown RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 NUDT2P50583 147 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 DAP3P51398 398 aaKnown RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 ZNF84P51523 738 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 PSME3P61289 254 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 MYBPC1Q00872 1141 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 PRKCDQ05655 676 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 RAB39AQ14964 217 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 TRAM2Q15035 370 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 EFNB3Q15768 340 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 IFI44LQ53G44 452 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 GLYATQ6IB77 296 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 KRT80Q6KB66 452 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 VTCN1Q7Z7D3 282 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 CDK20Q8IZL9 346 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 RNF113BQ8IZP6 322 aaKnown RBP6.42□□□□□ -1.38
NUP88-205ENST00000572809 ZNF525Q8N782 197 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 SYT14Q8NB59 555 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 MOSPD2Q8NHP6 518 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 FGFBP3Q8TAT2 258 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 ASB10Q8WXI3 467 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 FAM162AQ96A26 154 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 BPIFA2Q96DR5 249 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 PRRC1Q96M27 445 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 SORCS2Q96PQ0 1159 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 ZNF347Q96SE7 839 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 DOK1Q99704 481 aa6.42□□□□□ -1.38
NUP88-205ENST00000572809 SH3GL3Q99963 347 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms