RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 A0A0G2JN53 185 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 CLDN25C9JDP6 229 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 H0YIG0 161 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 C16orf97H3BN30 126 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 GFYI3L273 518 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 CLOCKO15516 846 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 HCN1O60741 890 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 B3GALNT1O75752 331 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 SNAPC5O75971 98 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 ZFAND5O76080 213 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 H6PDO95479 791 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 ECDO95905 644 aaPredicted RBP4.6□□□□□ -1.67
SF3B3-214ENST00000572365 FGGP02679 453 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 FTH1P02794 183 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 OR56A5P0C7T3 313 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 PAX1P15863 534 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 IMPDH1P20839 514 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 CFL1P23528 166 aaKnown RBP4.6□□□□□ -1.67
SF3B3-214ENST00000572365 GDF1P27539 372 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 CCKARP32238 428 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 CBX5P45973 191 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 RAB8AP61006 207 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 RPS4XP62701 263 aaKnown RBP4.6□□□□□ -1.67
SF3B3-214ENST00000572365 BAMBIQ13145 260 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 POU6F1Q14863 301 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 HERC3Q15034 1050 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 OXA1LQ15070 435 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 PDK1Q15118 436 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 TRIP10Q15642 601 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 TRIP13Q15645 432 aaPredicted RBP4.6□□□□□ -1.67
SF3B3-214ENST00000572365 HADHQ16836 314 aaKnown RBP4.6□□□□□ -1.67
SF3B3-214ENST00000572365 ELFN2Q5R3F8 820 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 CCNYL2Q5T2Q4 361 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 LGSNQ5TDP6 509 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 NFE4Q86UQ8 179 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 RFLNBQ8N5W9 214 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 PACRGLQ8N7B6 248 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 ASCC1Q8N9N2 400 aaKnown RBP4.6□□□□□ -1.67
SF3B3-214ENST00000572365 THAP8Q8NA92 274 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 POC1AQ8NBT0 407 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 B3GNT7Q8NFL0 401 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 OR2T12Q8NG77 320 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 RDH11Q8TC12 318 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 MGARPQ8TDB4 240 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 MCOLN3Q8TDD5 553 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.6□□□□□ -1.67
SF3B3-214ENST00000572365 RAD51AP1Q96B01 352 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF486Q96H40 463 aaPredicted RBP4.6□□□□□ -1.67
SF3B3-214ENST00000572365 INTS14Q96SY0 518 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 SYT11Q9BT88 431 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 RAB11FIP5Q9BXF6 653 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 GALPQ9UBC7 116 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 DNAJB9Q9UBS3 223 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 TBK1Q9UHD2 729 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 DAPK2Q9UIK4 370 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 CAB39Q9Y376 341 aaPredicted RBP4.6□□□□□ -1.67
SF3B3-214ENST00000572365 ARHGAP32A7KAX9 2087 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 TRBV5-4A0A0C4DH59 114 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 A0A1W2PPK0 400 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 TRPC5OSA6NMA1 111 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 K7EPI3 171 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 SLC22A2O15244 555 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 AP2A2O94973 939 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 CLDN9O95484 217 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 TGM6O95932 706 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 TGFAP01135 160 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 EPOP01588 193 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 CD8AP01732 235 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 SERPINA6P08185 405 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 F7P08709 466 aaPredicted RBP4.59□□□□□ -1.67
SF3B3-214ENST00000572365 POU2F1P14859 743 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 CCNA2P20248 432 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 IL10P22301 178 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 CTNNA2P26232 953 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 PSMB4P28070 264 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 UGT2B10P36537 528 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 SRP14P37108 136 aaKnown RBP4.59□□□□□ -1.67
SF3B3-214ENST00000572365 DEFA1P59665 94 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 DEFA3P59666 94 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 SSTP61278 116 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 DLK1P80370 383 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 PRDX1Q06830 199 aaKnown RBP4.59□□□□□ -1.67
SF3B3-214ENST00000572365 NAB1Q13506 487 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 EFTUD2Q15029 972 aaKnown RBP eCLIP4.59□□□□□ -1.672e-14■■■□□ 18.7
SF3B3-214ENST00000572365 PDK2Q15119 407 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 GPR33Q49SQ1 333 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 CCDC58Q4VC31 144 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 ARFGEF3Q5TH69 2177 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 SLC22A10Q63ZE4 541 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 WBP2NLQ6ICG8 309 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 C11orf63Q6NUN7 778 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 PPP1R2P3Q6NXS1 205 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 ALKBH5Q6P6C2 394 aaKnown RBP4.59□□□□□ -1.67
SF3B3-214ENST00000572365 CORO6Q6QEF8 472 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 RTL4Q6ZR62 310 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 MSANTD1Q6ZTZ1 278 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 SH2D5Q6ZV89 423 aa4.59□□□□□ -1.67
SF3B3-214ENST00000572365 CLVS1Q8IUQ0 354 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms