RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 CALM1P0DP23 149 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 CALM2P0DP24 149 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 CALM3P0DP25 149 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 VHLP40337 213 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 FBXW4P57775 412 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 NUTF2P61970 127 aaKnown RBP2.15□□□□□ -2.07
PALB2-203ENST00000565038 PPIL2Q13356 520 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 ZNF77Q15935 545 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 PRSS8Q16651 343 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 CEMP1Q6PRD7 247 aaPredicted RBP2.15□□□□□ -2.07
PALB2-203ENST00000565038 PEX26Q7Z412 305 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 OAFQ86UD1 273 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 TRPV1Q8NER1 839 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 RGP1Q92546 391 aaPredicted RBP2.15□□□□□ -2.07
PALB2-203ENST00000565038 C12orf42Q96LP6 360 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 P2RX4Q99571 388 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 CCT7Q99832 543 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 HMG20AQ9NP66 347 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 ISYNA1Q9NPH2 558 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 GPATCH2LQ9NWQ4 482 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 ABCA10Q8WWZ4 1543 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 NUP160Q12769 1436 aa2.15□□□□□ -2.07
PALB2-203ENST00000565038 GRIN2AQ12879 1464 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 CLASP1Q7Z460 1538 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 TRAV39A0A0B4J263 110 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 BTBD17A6NE02 478 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 MAS1LP35410 378 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 CEACAM6P40199 344 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 CDH4P55283 916 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 SEC61GP60059 68 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 UBE2HP62256 183 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 LOXL1Q08397 574 aaPredicted RBP2.14□□□□□ -2.07
PALB2-203ENST00000565038 MAB21L1Q13394 359 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 PRR9Q5T870 116 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 HDDC2Q7Z4H3 204 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 PSTKQ8IV42 348 aaKnown RBP2.14□□□□□ -2.07
PALB2-203ENST00000565038 OSR2Q8N2R0 312 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 SDR9C7Q8NEX9 313 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 OR52M1Q8NGK5 317 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 OR1L6Q8NGR2 347 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 CREB3L1Q96BA8 519 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 SH3GL1Q99961 368 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 SLC25A2Q9BXI2 301 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 ATP6V0A2Q9Y487 856 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 SYNJ1O43426 1573 aa2.14□□□□□ -2.07
PALB2-203ENST00000565038 MAGI1Q96QZ7 1491 aaPredicted RBP2.14□□□□□ -2.07
PALB2-203ENST00000565038 A0A1W2PPV9 198 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 TMEM223A0PJW6 202 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 PCP4L1A6NKN8 68 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 F6UB75 175 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 SPECC1L-ADORA2AF8WAN1 911 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 GOSR2O14653 212 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 RRP8O43159 456 aaKnown RBP2.13□□□□□ -2.07
PALB2-203ENST00000565038 RP2O75695 350 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 CCNKO75909 580 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 HLA-DPB1P04440 258 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 POLR2MP0CAP2 368 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 ATP1B2P14415 290 aaPredicted RBP2.13□□□□□ -2.07
PALB2-203ENST00000565038 ETS2P15036 469 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 EPS15P42566 896 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 CX3CR1P49238 355 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 AIF1P55008 147 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 ARG2P78540 354 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 RGNQ15493 299 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 RABL6Q3YEC7 729 aaPredicted RBP2.13□□□□□ -2.07
PALB2-203ENST00000565038 FAM78AQ5JUQ0 283 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 DNLZQ5SXM8 178 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 SPECC1LQ69YQ0 1117 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 PRMT9Q6P2P2 845 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 TMEM135Q86UB9 458 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 LRRC75A-AS1Q8N1F1 130 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 OR4F6Q8NGB9 312 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 RNF139Q8WU17 664 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 ABHD3Q8WU67 409 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 L3HYPDHQ96EM0 354 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 SLC41A3Q96GZ6 507 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 IFT74Q96LB3 600 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 ZNF382Q96SR6 550 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 OSBPL11Q9BXB4 747 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 GON7Q9BXV9 100 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 SYNDIG1Q9H7V2 258 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 WFDC1Q9HC57 220 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 BLOC1S6Q9UL45 172 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 PEX16Q9Y5Y5 336 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 TNS2Q63HR2 1409 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 YEATS2Q9ULM3 1422 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 CEP170Q5SW79 1584 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 CHD1O14646 1710 aa2.13□□□□□ -2.07
PALB2-203ENST00000565038 TNIKQ9UKE5 1360 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 CABIN1Q9Y6J0 2220 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 K7EM74 188 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 FOXE1O00358 373 aaPredicted RBP2.12□□□□□ -2.07
PALB2-203ENST00000565038 PPP1R2P9O14990 202 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 PSTPIP1O43586 416 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 ZNF207O43670 478 aaKnown RBP2.12□□□□□ -2.07
PALB2-203ENST00000565038 RAB3DO95716 219 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 AIFM1O95831 613 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 IL1BP01584 269 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 OR56A5P0C7T3 313 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 GLRA2P23416 452 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms