RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 ZNF84P51523 738 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 HMGA2P52926 109 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 CTXN1P60606 82 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 GALK2Q01415 458 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 SPIBQ01892 262 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 FMODQ06828 376 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 FHL1Q13642 323 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 FLOT2Q14254 428 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 ANKDD1AQ495B1 522 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 RRM2BQ7LG56 351 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 ADGRG5Q8IZF4 528 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 CDK20Q8IZL9 346 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 ZCCHC24Q8N2G6 241 aaKnown RBP11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 NUP37Q8NFH4 326 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 OR13C2Q8NGS9 318 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 OR52J3Q8NH60 311 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 HDAC2Q92769 488 aaKnown RBP11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 SYT3Q9BQG1 590 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 PLK3Q9H4B4 646 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 TMEM5Q9Y2B1 443 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 EFCAB9A8MZ26 197 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 CDC42EP2O14613 210 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 KRT36O76013 467 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 F12P00748 615 aaPredicted RBP11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 FAM157BP0CG42 384 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 RAP2AP10114 183 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 RRM2P31350 389 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 CDAP32320 146 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 OMPP47874 163 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 LIMS1P48059 325 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 PDLIM4P50479 330 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 DSCR9P59020 149 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 GGTLC2Q14390 218 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 SGCAQ16586 387 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 TMEM53Q6P2H8 277 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 ASRGL1Q7L266 308 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF627Q7L945 461 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 SLC16A14Q7RTX9 510 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 CLDN22Q8N7P3 220 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 ICA1LQ8NDH6 482 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 IL17RDQ8NFM7 739 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 OR10H5Q8NGA6 315 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 CANT1Q8WVQ1 401 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF75AQ96N20 296 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 TNFRSF13CQ96RJ3 184 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 TPK1Q9H3S4 243 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF442Q9H7R0 627 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF346Q9UL40 294 aaKnown RBP11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 CMAHPQ9Y471 501 aa11.77□□□□□ -0.53
VPS9D1-204ENST00000565023 RTTNQ86VV8 2226 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 NBEAL1Q6ZS30 2694 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 IGKV1D-43A0A0B4J1Z2 117 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 TCRBV3S1A0A5B6 114 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 DHRS12A0PJE2 317 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 NPIPB13A6NJU9 1138 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 NPIPB4C9JG80 1138 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 EBAG9O00559 213 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 ADRA2AP08913 450 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 HOXB6P17509 224 aaKnown RBP11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 NR4A1P22736 598 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 EFNB3Q15768 340 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 MSMPQ1L6U9 139 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 ARMC4Q5T2S8 1044 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 CCDC121Q6ZUS5 278 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 HDDC2Q7Z4H3 204 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 OAFQ86UD1 273 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF584Q8IVC4 421 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 LRRC75AQ8NAA5 344 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 C10orf105Q8TEF2 133 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 FAM46AQ96IP4 442 aaKnown RBP11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 CHID1Q9BWS9 393 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 MRPL37Q9BZE1 423 aaKnown RBP11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 RAB1BQ9H0U4 201 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 TXNIPQ9H3M7 391 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 CDH20Q9HBT6 801 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 SPEF1Q9Y4P9 236 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 LYVE1Q9Y5Y7 322 aa11.76□□□□□ -0.53
VPS9D1-204ENST00000565023 A0A1W2PPL8 197 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 TMEM129A0AVI4 362 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 H7C1C5 153 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 PTP4A3O75365 173 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF35P13682 527 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 SLC25A16P16260 332 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 CCNOP22674 350 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 RPL4P36578 427 aaKnown RBP11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 PPOXP50336 477 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 RPL27P61353 136 aaKnown RBP11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 LCN6P62502 163 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 ERVK-25P63136 954 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 HSF2Q03933 536 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 MAD2L1BPQ15013 274 aaPredicted RBP11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 ALKBH6Q3KRA9 238 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 SLC36A2Q495M3 483 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 ZBED5Q49AG3 693 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 OR2T5Q6IEZ7 315 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 ZER1Q7Z7L7 766 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 LRP11Q86VZ4 500 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 SPATA24Q86W54 205 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 SLC30A7Q8NEW0 376 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms