RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 COMMD3Q9UBI1 195 aa6.67□□□□□ -1.34
MAP1LC3B-205ENST00000564638 TEKT2Q9UIF3 430 aa6.67□□□□□ -1.34
MAP1LC3B-205ENST00000564638 LAMP5Q9UJQ1 280 aa6.67□□□□□ -1.34
MAP1LC3B-205ENST00000564638 TUBD1Q9UJT1 453 aa6.67□□□□□ -1.34
MAP1LC3B-205ENST00000564638 NPIPA1Q9UND3 350 aa6.67□□□□□ -1.34
MAP1LC3B-205ENST00000564638 VDAC3Q9Y277 283 aa6.67□□□□□ -1.34
MAP1LC3B-205ENST00000564638 GRIP1Q9Y3R0 1128 aa6.67□□□□□ -1.34
MAP1LC3B-205ENST00000564638 FBN3Q75N90 2809 aa6.67□□□□□ -1.34
MAP1LC3B-205ENST00000564638 POLQO75417 2590 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SHISA3A0PJX4 238 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PRSS37A4D1T9 235 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 FABP12A6NFH5 140 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 TVP23AA6NH52 213 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 NPIPB13A6NJU9 1138 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 FAM25AB3EWG3 89 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 FAM25CB3EWG5 89 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 FAM25GB3EWG6 89 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ZNF879B4DU55 563 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 NPIPB4C9JG80 1138 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 FTCDNL1E5RQL4 147 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ETV2O00321 342 aaPredicted RBP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PDCD5O14737 125 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 TMCC2O75069 709 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SC5DO75845 299 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 NCR1O76036 304 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 HNRNPCP07910 306 aaKnown RBP eCLIP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 MAPK3P27361 379 aaPredicted RBP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PSMB10P40306 273 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PTGDSP41222 190 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 DAP3P51398 398 aaKnown RBP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SSR4P51571 173 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 CAV3P56539 151 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SOX8P57073 446 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ARG2P78540 354 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SCN1BQ07699 218 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PUDPQ08623 228 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ZP4Q12836 540 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 MFAP5Q13361 173 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SNTA1Q13424 505 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 OR7A5Q15622 319 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PLPPR5Q32ZL2 321 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ACSM3Q53FZ2 586 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PYDC2Q56P42 97 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SLC25A53Q5H9E4 307 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ZMAT1Q5H9K5 638 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 IDNKQ5T6J7 187 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 BICRALQ6AI39 1079 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 C3orf33Q6P1S2 294 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 CNIH2Q6PI25 160 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 LYPD4Q6UWN0 246 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ARSKQ6UWY0 536 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 H1FNTQ75WM6 255 aaPredicted RBP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 TRILQ7L0X0 811 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PXKQ7Z7A4 578 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 CDC20BQ86Y33 519 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 TIGD4Q8IY51 512 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PM20D2Q8IYS1 436 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 YIPF7Q8N8F6 280 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SLC25A43Q8WUT9 341 aaPredicted RBP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ZNRF4Q8WWF5 429 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ASB17Q8WXJ9 295 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 PHYHIPQ92561 330 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 HTRA1Q92743 480 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 THRSPQ92748 146 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 GHSRQ92847 366 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 DNAJA3Q96EY1 480 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 TSSK2Q96PF2 358 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SDHCQ99643 169 aaPredicted RBP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SMAD5Q99717 465 aaKnown RBP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.66□□□□□ -1.343e-6■■■□□ 14.9
MAP1LC3B-205ENST00000564638 PTGES2Q9H7Z7 377 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SRA1Q9HD15 236 aaKnown RBP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 VSX1Q9NZR4 365 aaPredicted RBP6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 LUZP4Q9P127 313 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 IKZF2Q9UKS7 526 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SVILO95425 2214 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 EML6Q6ZMW3 1958 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 KIAA1549Q9HCM3 1950 aa6.66□□□□□ -1.34
MAP1LC3B-205ENST00000564638 A0A087WZY1 265 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 TRAV1-2A0A0B4J238 106 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ANKRD61A6NGH8 418 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 LIPT2A6NK58 231 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 CENPBD1B2RD01 187 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 B8ZZF3 427 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 DCTN6O00399 190 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 DVL2O14641 736 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 MAGEB4O15481 346 aaPredicted RBP6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 HPGDSO60760 199 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ITGA10O75578 1167 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 ZNF432O94892 652 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 AKR7A3O95154 331 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 WDPCPO95876 746 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 HLA-DQA2P01906 255 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 UCHL1P09936 223 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 OR8G3PP0DMU2 310 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 IL7P13232 177 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 RAB3BP20337 219 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 SHC1P29353 583 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 CRABP1P29762 137 aa6.65□□□□□ -1.34
MAP1LC3B-205ENST00000564638 TALDO1P37837 337 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms