RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 PROCRQ9UNN8 238 aa14.96□□□□□ -0.01
CMTM3-208ENST00000564247 C19orf84I3L1E1 186 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 DHHO43323 396 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 FAM20BO75063 409 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 UPK3AO75631 287 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 GYPBP06028 91 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 OPRM1P35372 400 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 ATP6V1E1P36543 226 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 FOXF2Q12947 444 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 KLHL22Q53GT1 634 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 TSPO2Q5TGU0 170 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 LRFN4Q6PJG9 635 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 SLC25A47Q6Q0C1 308 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 ZBTB46Q86UZ6 589 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 BBS1Q8NFJ9 593 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 NSMAFQ92636 917 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 RBM24Q9BX46 236 aaKnown RBP14.95□□□□□ -0.02
CMTM3-208ENST00000564247 RACGAP1Q9H0H5 632 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 PLSCR4Q9NRQ2 329 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 PLCXD1Q9NUJ7 323 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 BLOC1S6Q9UL45 172 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 TPRKBQ9Y3C4 175 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 INTS1Q8N201 2190 aaKnown RBP14.95□□□□□ -0.02
CMTM3-208ENST00000564247 APCP25054 2843 aa14.95□□□□□ -0.02
CMTM3-208ENST00000564247 LRBAP50851 2863 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 A0A0G2JNJ9 132 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 IRGMA1A4Y4 181 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 FAM171A2A8MVW0 826 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 ZNF587BE7ETH6 402 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 IL18BPO95998 194 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 IGHV3-9P01782 118 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 HLA-DQA2P01906 255 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 CCDC159P0C7I6 412 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 CLUP10909 449 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 CTLA4P16410 223 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 PYCR1P32322 319 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 MTNR1AP48039 350 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 ZNF133P52736 654 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-208ENST00000564247 NUDT6P53370 316 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 GLO1Q04760 184 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 FMODQ06828 376 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 STK11Q15831 433 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 SMN1Q16637 294 aaKnown RBP14.94□□□□□ -0.02
CMTM3-208ENST00000564247 FBXW9Q5XUX1 488 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.94□□□□□ -0.02
CMTM3-208ENST00000564247 GLB1L2Q8IW92 636 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 ACBD4Q8NC06 268 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 OR51L1Q8NGJ5 315 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 OR6K6Q8NGW6 343 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 NMD3Q96D46 503 aaKnown RBP14.94□□□□□ -0.02
CMTM3-208ENST00000564247 SEC61A2Q9H9S3 476 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 CRLF2Q9HC73 371 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 GPR35Q9HC97 309 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 AMBNQ9NP70 447 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 SLC7A10Q9NS82 523 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 ZNF629Q9UEG4 869 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-208ENST00000564247 Q9UFV3 132 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 MYRFQ9Y2G1 1151 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 COA3Q9Y2R0 106 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-208ENST00000564247 FREM1Q5H8C1 2179 aa14.94□□□□□ -0.02
CMTM3-208ENST00000564247 IGLV1-36A0A0B4J1U3 117 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 EFCAB10A6NFE3 127 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 DCTN6O00399 190 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 TNFSF13O75888 250 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 SMNDC1O75940 238 aaKnown RBP eCLIP14.93□□□□□ -0.02
CMTM3-208ENST00000564247 CNOT4O95628 575 aaKnown RBP14.93□□□□□ -0.02
CMTM3-208ENST00000564247 COX6B1P14854 86 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 SLC2A5P22732 501 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 LAP3P28838 519 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 GSTT1P30711 240 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 ROR2Q01974 943 aaKnown RBP14.93□□□□□ -0.02
CMTM3-208ENST00000564247 TFF3Q07654 80 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 FAPQ12884 760 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 ETFDHQ16134 617 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 PHYHD1Q5SRE7 291 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 C10orf128Q5T292 105 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 VWA1Q6PCB0 445 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 BTLAQ7Z6A9 289 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 STARD4Q96DR4 205 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 RNFT2Q96EX2 444 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 NR1H4Q96RI1 486 aaPredicted RBP14.93□□□□□ -0.02
CMTM3-208ENST00000564247 SPOCK3Q9BQ16 436 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 PIGMQ9H3S5 423 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 KCNJ16Q9NPI9 418 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 HAO2Q9NYQ3 351 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 PRSS50Q9UI38 385 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 PCDHGB5Q9Y5G0 923 aa14.93□□□□□ -0.02
CMTM3-208ENST00000564247 FBN2P35556 2912 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 A0A1W2PPL8 197 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 NKX2-6A6NCS4 301 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 CCDC182A6NF36 153 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 FAM90A27PA6NNH2 459 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 RPL36A-HNRNPH2H7BZ11 118 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 SLC1A7O00341 560 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 CD8BP10966 210 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 CHN2P52757 468 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 POU4F2Q12837 409 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 CEACAM16Q2WEN9 425 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 LAIR2Q6ISS4 152 aa14.92□□□□□ -0.02
CMTM3-208ENST00000564247 UGT2A3Q6UWM9 527 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms