RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 MAGEB1P43366 347 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 ERVS71-1P61550 626 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 PABPC1L2AQ5JQF8 200 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 TMEM154Q6P9G4 183 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 RFLNBQ8N5W9 214 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 PCYOX1LQ8NBM8 494 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 CPEB3Q8NE35 698 aaKnown RBP13.86□□□□□ -0.19
SNX1-213ENST00000561026 KCNN2Q9H2S1 579 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 TXNIPQ9H3M7 391 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 NARFLQ9H6Q4 476 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 FGFR1OP2Q9NVK5 253 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 GID8Q9NWU2 228 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 UGT2A1Q9Y4X1 527 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 IGKV1D-43A0A0B4J1Z2 117 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 HTR3EA5X5Y0 456 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 FAM220BPB1ANY3 271 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 PPIHO43447 177 aaKnown RBP13.85□□□□□ -0.19
SNX1-213ENST00000561026 TFP02787 698 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 APLNRP35414 380 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 SELENOWP63302 87 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 CCL8P80075 99 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 HSF2Q03933 536 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 ST3GAL3Q11203 375 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 SF3A3Q12874 501 aaKnown RBP eCLIP13.85□□□□□ -0.195e-6■■■■■ 39.5
SNX1-213ENST00000561026 PCGF3Q3KNV8 242 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 LRRC23Q53EV4 343 aaPredicted RBP13.85□□□□□ -0.19
SNX1-213ENST00000561026 CGB2Q6NT52 195 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 GLCCI1Q86VQ1 547 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 OR2T12Q8NG77 320 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 SNX33Q8WV41 574 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 HDAC2Q92769 488 aaKnown RBP13.85□□□□□ -0.19
SNX1-213ENST00000561026 NABP1Q96AH0 204 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 TPD52L3Q96J77 140 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 NKIRAS2Q9NYR9 191 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 TREM2Q9NZC2 230 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 HIF3AQ9Y2N7 669 aa13.85□□□□□ -0.19
SNX1-213ENST00000561026 FAM157AC9JC47 383 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 STOMP27105 288 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 LMO4P61968 165 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 FMODQ06828 376 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 CD47Q08722 323 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 TAF11Q15544 211 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 MOGQ16653 247 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 ALG10Q5BKT4 473 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 RINLQ6ZS11 566 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 ICA1LQ8NDH6 482 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 NSMAFQ92636 917 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 TMEM186Q96B77 213 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 BPIFA2Q96DR5 249 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 PRRC1Q96M27 445 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 CCNB1IP1Q9NPC3 277 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 HIF1ANQ9NWT6 349 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 A4GNTQ9UNA3 340 aa13.84□□□□□ -0.19
SNX1-213ENST00000561026 ELOVL7A1L3X0 281 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 GMNCA6NCL1 334 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 TCF21O43680 179 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 PIP5K1CO60331 668 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 CDC14BO60729 498 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 IGHV3-13P01766 116 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 MSMBP08118 114 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 GAAP10253 952 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 NR2C1P13056 603 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 IFI30P13284 250 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 ZNF32P17041 273 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 CCNOP22674 350 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 IFNA8P32881 189 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 RPL27P61353 136 aaKnown RBP13.83□□□□□ -0.19
SNX1-213ENST00000561026 SGCAQ16586 387 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 THEM4Q5T1C6 240 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 FAM27BQ5VT28 67 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 SLC25A47Q6Q0C1 308 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 MICU2Q8IYU8 434 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 OR1J1Q8NGS3 322 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 LZICQ8WZA0 190 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 POM121L2Q96KW2 1035 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 ALG12Q9BV10 488 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 LPAR2Q9HBW0 351 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 NBEAL1Q6ZS30 2694 aa13.83□□□□□ -0.19
SNX1-213ENST00000561026 LOC100509620A0A075B734 347 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 MT-ND5P03915 603 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 DRD4P21917 467 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 FUT4P22083 530 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 CRYBB2P43320 205 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 PSG4Q00888 419 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 TOP3AQ13472 1001 aaPredicted RBP13.83□□□□□ -0.2
SNX1-213ENST00000561026 ZNF101Q8IZC7 436 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 CLDN22Q8N7P3 220 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 LRRC75AQ8NAA5 344 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 AKR7LQ8NHP1 331 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 FNDC8Q8TC99 324 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 RBP7Q96R05 134 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 EIF3KQ9UBQ5 218 aaKnown RBP13.83□□□□□ -0.2
SNX1-213ENST00000561026 METRNQ9UJH8 293 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 SNX13Q9Y5W8 968 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 CAPN7Q9Y6W3 813 aa13.83□□□□□ -0.2
SNX1-213ENST00000561026 IGHV1-69-2A0A0G2JMI3 117 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 C5orf49A4QMS7 147 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 SLC22A2O15244 555 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 IGHMP01871 453 aa13.82□□□□□ -0.2
SNX1-213ENST00000561026 MAKP20794 623 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms