RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, human

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-215	ENST00000560982	ZNF133	P52736	654 aa	Predicted RBP	11.93	□□□□□ -0.5
USP8-215	ENST00000560982	LMO4	P61968	165 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	MRPS34	P82930	218 aa	Known RBP	11.93	□□□□□ -0.5
USP8-215	ENST00000560982	PCGF3	Q3KNV8	242 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	COQ5	Q5HYK3	327 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	PABPC1L2A	Q5JQF8	200 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	ARMC4	Q5T2S8	1044 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	ERICH5	Q6P6B1	374 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	OR1J1	Q8NGS3	322 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	LIPH	Q8WWY8	451 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	ZNF583	Q96ND8	569 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	LRRC37B	Q96QE4	947 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	OCEL1	Q9H607	264 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	METTL17	Q9H7H0	456 aa	Predicted RBP	11.93	□□□□□ -0.5
USP8-215	ENST00000560982	VIPAS39	Q9H9C1	493 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	SIAE	Q9HAT2	523 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	CCNB1IP1	Q9NPC3	277 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	NKIRAS2	Q9NYR9	191 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	NBEAL1	Q6ZS30	2694 aa		11.93	□□□□□ -0.5
USP8-215	ENST00000560982	MRAS	O14807	208 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	TPD52L2	O43399	206 aa	Known RBP	11.92	□□□□□ -0.5
USP8-215	ENST00000560982	NPPA	P01160	153 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	IFNA14	P01570	189 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	MT-ND5	P03915	603 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	THRB	P10828	461 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	TEK	Q02763	1124 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	MVK	Q03426	396 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	GLO1	Q04760	184 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	FMOD	Q06828	376 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	CD47	Q08722	323 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	LAPTM4A	Q15012	233 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	MOG	Q16653	247 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	LRRC23	Q53EV4	343 aa	Predicted RBP	11.92	□□□□□ -0.5
USP8-215	ENST00000560982	SHQ1	Q6PI26	577 aa	Known RBP	11.92	□□□□□ -0.5
USP8-215	ENST00000560982	CPEB3	Q8NE35	698 aa	Known RBP	11.92	□□□□□ -0.5
USP8-215	ENST00000560982	OR51F2	Q8NH61	342 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	C10orf82	Q8WW14	230 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	NSMAF	Q92636	917 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	HDAC2	Q92769	488 aa	Known RBP	11.92	□□□□□ -0.5
USP8-215	ENST00000560982	NABP1	Q96AH0	204 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	SMURF2	Q9HAU4	748 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	MRGBP	Q9NV56	204 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	UGT2A1	Q9Y4X1	527 aa		11.92	□□□□□ -0.5
USP8-215	ENST00000560982	IGKV1D-43	A0A0B4J1Z2	117 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	IGHV1-69-2	A0A0G2JMI3	117 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	NPIPB13	A6NJU9	1138 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	BBIP1	A8MTZ0	92 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	NPIPB4	C9JG80	1138 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	PIP5K1C	O60331	668 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	IGHV3-13	P01766	116 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	TROVE2	P10155	538 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
USP8-215	ENST00000560982	NR2C1	P13056	603 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	ZNF32	P17041	273 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	STOM	P27105	288 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	KDELR2	P33947	212 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	CRYBB2	P43320	205 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	KLF10	Q13118	480 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	TOP3A	Q13472	1001 aa	Predicted RBP	11.91	□□□□□ -0.5
USP8-215	ENST00000560982	MAPRE2	Q15555	327 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	SGCA	Q16586	387 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	CYBRD1	Q53TN4	286 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	ALG10	Q5BKT4	473 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	AVPI1	Q5T686	147 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	USP51	Q70EK9	711 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	GTF3A	Q92664	365 aa	Known RBP	11.91	□□□□□ -0.5
USP8-215	ENST00000560982	NMD3	Q96D46	503 aa	Known RBP	11.91	□□□□□ -0.5
USP8-215	ENST00000560982	TPD52L3	Q96J77	140 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	POM121L2	Q96KW2	1035 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	TXNIP	Q9H3M7	391 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	ZNF665	Q9H7R5	613 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	DECR2	Q9NUI1	292 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.91	□□□□□ -0.5
USP8-215	ENST00000560982	HIF3A	Q9Y2N7	669 aa		11.91	□□□□□ -0.5
USP8-215	ENST00000560982	TRAV20	A0A0B4J274	112 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	C5orf49	A4QMS7	147 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	GMNC	A6NCL1	334 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	FAM220BP	B1ANY3	271 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	IFI30	P13284	250 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	ANPEP	P15144	967 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	GCH1	P30793	250 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	GDI2	P50395	445 aa	Known RBP	11.9	□□□□□ -0.5
USP8-215	ENST00000560982	ZNF81	P51508	661 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	ARFIP2	P53365	341 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	ERVK-25	P63136	954 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	ST3GAL3	Q11203	375 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
USP8-215	ENST00000560982	SCGB2A2	Q13296	93 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	TAF11	Q15544	211 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	TST	Q16762	297 aa	Known RBP	11.9	□□□□□ -0.5
USP8-215	ENST00000560982	ZNF718	Q3SXZ3	478 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	SPATA46	Q5T0L3	261 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.9	□□□□□ -0.5
USP8-215	ENST00000560982	SLC25A47	Q6Q0C1	308 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	MEX3D	Q86XN8	651 aa	Known RBP	11.9	□□□□□ -0.5
USP8-215	ENST00000560982	ZNF101	Q8IZC7	436 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.9	□□□□□ -0.5
USP8-215	ENST00000560982	AKR7L	Q8NHP1	331 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	BPIFA2	Q96DR5	249 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	FAHD2A	Q96GK7	314 aa		11.9	□□□□□ -0.5
USP8-215	ENST00000560982	PRRC1	Q96M27	445 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms