RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZNF248Q8NDW4 579 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 FAM83FQ8NEG4 500 aaPredicted RBP6.57□□□□□ -1.36
SPG11-204ENST00000557866 KBTBD8Q8NFY9 601 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 THAP4Q8WY91 577 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 PELI1Q96FA3 418 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 PGLYRP3Q96LB9 341 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 AMELYQ99218 206 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 EMC6Q9BV81 110 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 TMED9Q9BVK6 235 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 MRPL13Q9BYD1 178 aaKnown RBP6.57□□□□□ -1.36
SPG11-204ENST00000557866 SRXN1Q9BYN0 137 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 BARHL1Q9BZE3 327 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 OR2B2Q9GZK3 357 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 RERGLQ9H628 205 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 CCDC59Q9P031 241 aaKnown RBP6.57□□□□□ -1.36
SPG11-204ENST00000557866 MRM2Q9UI43 246 aaKnown RBP6.57□□□□□ -1.36
SPG11-204ENST00000557866 NPIPA1Q9UND3 350 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 SSR3Q9UNL2 185 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 TRAPPC4Q9Y296 219 aa6.57□□□□□ -1.36
SPG11-204ENST00000557866 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.57□□□□□ -1.36
SPG11-204ENST00000557866 ZFHX2Q9C0A1 2572 aaPredicted RBP6.57□□□□□ -1.36
SPG11-204ENST00000557866 A0A087WV48 116 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 IGHV3-15A0A0B4J1V0 119 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 LOC102725191A0A1B0GVB3 256 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 CD8B2A6NJW9 211 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 SULT2B1O00204 365 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 PSMD9O00233 223 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 TNFSF11O14788 317 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 SLC30A4O14863 429 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 PLPP2O43688 288 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 GAAP10253 952 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 PRKAR1AP10644 381 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 ALOX5APP20292 161 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 FGF9P31371 208 aaPredicted RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 PSMB10P40306 273 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 RFC3P40938 356 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 STARP49675 285 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 DAP3P51398 398 aaKnown RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 SUCLG1P53597 346 aaKnown RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 BIDP55957 195 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 CLDN20P56880 219 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 SOX8P57073 446 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 SLC35A1P78382 337 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 HSF2Q03933 536 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 FMODQ06828 376 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 SLC3A1Q07837 685 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 RTP5Q14D33 572 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 MEP1BQ16820 701 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 ZNF404Q494X3 552 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 FAM205BPQ63HN1 556 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 ARL9Q6T311 187 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 PLEKHG7Q6ZR37 379 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 GGNQ86UU5 652 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 UEVLDQ8IX04 471 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 SYS1Q8N2H4 156 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 GALNT16Q8N428 558 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 MFSD4AQ8N468 514 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 CLEC1AQ8NC01 280 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 MDS2Q8NDY4 140 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 OR2M7Q8NG81 312 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 OR6N2Q8NGY6 317 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 RPS4Y2Q8TD47 263 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 KIAA1143Q96AT1 154 aaPredicted RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 ADGRG7Q96K78 797 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 COX4I2Q96KJ9 171 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 ADAD1Q96M93 576 aaKnown RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 KLHL15Q96M94 604 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 OXGR1Q96P68 337 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 INTS14Q96SY0 518 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 FAM173AQ9BQD7 235 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 PIGQQ9BRB3 760 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 UTP23Q9BRU9 249 aaKnown RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 HDHD5Q9BXW7 423 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 PPIL3Q9H2H8 161 aaKnown RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 ZNF552Q9H707 407 aaPredicted RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 AKIP1Q9NQ31 210 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 TRIM36Q9NQ86 728 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 ACOXLQ9NUZ1 547 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 TEKT2Q9UIF3 430 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 KCNG2Q9UJ96 466 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 GNG8Q9UK08 70 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 ING1Q9UK53 422 aaPredicted RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 COA3Q9Y2R0 106 aaPredicted RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 MRPS18CQ9Y3D5 142 aaKnown RBP6.56□□□□□ -1.36
SPG11-204ENST00000557866 PCDHGB7Q9Y5F8 929 aa6.56□□□□□ -1.36
SPG11-204ENST00000557866 ALPK2Q86TB3 2170 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 ZNF292O60281 2723 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 J3QRK9 145 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 ZNF593O00488 134 aaPredicted RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 GABRPO00591 440 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 KHDRBS3O75525 346 aaKnown RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 UPK3AO75631 287 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 SC5DO75845 299 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 TRAPPC6AO75865 159 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 GLSO94925 669 aaPredicted RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 CDRT1O95170 752 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 HLA-DPB1P04440 258 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 PGA4P0DJD7 388 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 PGA3P0DJD8 388 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 OR8G3PP0DMU2 310 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms