RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 IFT27Q9BW83 186 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 LRMDAQ9H2I8 198 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 C1orf198Q9H425 327 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 RERGLQ9H628 205 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 BARX1Q9HBU1 254 aaPredicted RBP10.51□□□□□ -0.73
SRP54-206ENST00000555317 CA10Q9NS85 328 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 ZNF701Q9NV72 531 aaPredicted RBP10.51□□□□□ -0.73
SRP54-206ENST00000555317 B3GNT2Q9NY97 397 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 IER3IP1Q9Y5U9 82 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 PMF1-BGLAPU3KQ54 211 aa10.51□□□□□ -0.73
SRP54-206ENST00000555317 PRSS37A4D1T9 235 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 SOCS2O14508 198 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 ACOT8O14734 319 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 PTP4A3O75365 173 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 CST1P01037 141 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 PATE4P0C8F1 98 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 CD99P14209 185 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 PAX1P15863 534 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 CALCRP30988 508 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 CDAP32320 146 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 ZNF133P52736 654 aaPredicted RBP10.5□□□□□ -0.73
SRP54-206ENST00000555317 PCBD1P61457 104 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 RPS23P62266 143 aaKnown RBP10.5□□□□□ -0.73
SRP54-206ENST00000555317 BNIP1Q12981 228 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 TSPAN31Q12999 210 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 SNTB2Q13425 540 aaKnown RBP10.5□□□□□ -0.73
SRP54-206ENST00000555317 GK3PQ14409 553 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 RAB39AQ14964 217 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 ETFDHQ16134 617 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 MESTQ5EB52 335 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 RPL13AP3Q6NVV1 102 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 PGBD2Q6P3X8 592 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 DNM1P34Q6PK57 102 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 SLC25A47Q6Q0C1 308 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 PRSS57Q6UWY2 283 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 MYPOPQ86VE0 399 aaPredicted RBP10.5□□□□□ -0.73
SRP54-206ENST00000555317 CLDN22Q8N7P3 220 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 SLC30A7Q8NEW0 376 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 WFDC11Q8NEX6 87 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 NUP37Q8NFH4 326 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 OR1J2Q8NGS2 313 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 HTRA1Q92743 480 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 SLC7A6OSQ96CW6 309 aaPredicted RBP10.5□□□□□ -0.73
SRP54-206ENST00000555317 FBXO17Q96EF6 278 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 ERMAPQ96PL5 475 aaPredicted RBP10.5□□□□□ -0.73
SRP54-206ENST00000555317 CHID1Q9BWS9 393 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 CACNG6Q9BXT2 260 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 GRIP2Q9C0E4 1043 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 CDH20Q9HBT6 801 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 NOX3Q9HBY0 568 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 NRIP3Q9NQ35 241 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 ZNF224Q9NZL3 707 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 U3KQV3 271 aa10.5□□□□□ -0.73
SRP54-206ENST00000555317 TLN2Q9Y4G6 2542 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 SLC22A23A1A5C7 686 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 OVOL3O00110 214 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 E2F6O75461 281 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 PPP1R3DO95685 299 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 RENP00797 406 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 CD8AP01732 235 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 SERPINA5P05154 406 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 ZNF14P17017 642 aaPredicted RBP10.49□□□□□ -0.73
SRP54-206ENST00000555317 ZNF26P17031 533 aaPredicted RBP10.49□□□□□ -0.73
SRP54-206ENST00000555317 MSR1P21757 451 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 APLNRP35414 380 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 SERPINF1P36955 418 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 GSSP48637 474 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 HMGA2P52926 109 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 RAB35Q15286 201 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 TBC1D28Q2M2D7 210 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 RFX4Q33E94 735 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 KRT80Q6KB66 452 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 C1orf94Q6P1W5 598 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 THSD4Q6ZMP0 1018 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 FAM122BQ7Z309 247 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 ALDH16A1Q8IZ83 802 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 ADGRG5Q8IZF4 528 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 AQP11Q8NBQ7 271 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 OR9Q2Q8NGE9 314 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 IGFBPL1Q8WX77 278 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 NMD3Q96D46 503 aaKnown RBP10.49□□□□□ -0.73
SRP54-206ENST00000555317 MS4A3Q96HJ5 214 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 SAMD8Q96LT4 415 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 Q96MF0 132 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 GPA33Q99795 319 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 FBXO9Q9UK97 447 aaPredicted RBP10.49□□□□□ -0.73
SRP54-206ENST00000555317 POMPQ9Y244 141 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 UGT2A1Q9Y4X1 527 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 CDH10Q9Y6N8 788 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 ARFGEF3Q5TH69 2177 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 RTTNQ86VV8 2226 aa10.49□□□□□ -0.73
SRP54-206ENST00000555317 SETD2Q9BYW2 2564 aaPredicted RBP10.48□□□□□ -0.73
SRP54-206ENST00000555317 IGKV1D-43A0A0B4J1Z2 117 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 C12orf71A8MTZ7 269 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 B9A039 149 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 GSC2O15499 205 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 SLC16A7O60669 478 aa10.48□□□□□ -0.73
SRP54-206ENST00000555317 KHDRBS3O75525 346 aaKnown RBP10.48□□□□□ -0.73
SRP54-206ENST00000555317 CIB2O75838 187 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms