RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 PROKR2Q8NFJ6 384 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 FAM81AQ8TBF8 368 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 TMEM163Q8TC26 289 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 ZNRF4Q8WWF5 429 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 CYGBQ8WWM9 190 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 FOXN4Q96NZ1 517 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 IL4I1Q96RQ9 567 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 USB1Q9BQ65 265 aaKnown RBP10.73□□□□□ -0.69
SHMT2-209ENST00000553949 ADI1Q9BV57 179 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 HCAR1Q9BXC0 346 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 RACGAP1Q9H0H5 632 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 NELFAQ9H3P2 528 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 MED20Q9H944 212 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 SEC61A2Q9H9S3 476 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 COA3Q9Y2R0 106 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-209ENST00000553949 HELZ2Q9BYK8 2649 aaKnown RBP10.73□□□□□ -0.69
SHMT2-209ENST00000553949 TENM4Q6N022 2769 aa10.73□□□□□ -0.69
SHMT2-209ENST00000553949 A1L4Q6 167 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 TUBAL3A6NHL2 446 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 OR5H1A6NKK0 313 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 H0YAE9 185 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 GPANK1O95872 356 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 GYPBP06028 91 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 OR8G3PP0DMU2 310 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 PPP3CBP16298 524 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 IGFBP2P18065 325 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 LAP3P28838 519 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 HOXC12P31275 282 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 VHLP40337 213 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 PEX19P40855 299 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 GUCA1AP43080 201 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-209ENST00000553949 CENPAP49450 140 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 ADARB1P78563 741 aaKnown RBP10.72□□□□□ -0.69
SHMT2-209ENST00000553949 GLO1Q04760 184 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 SNCBQ16143 134 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 TIMM23BQ5SRD1 257 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 TTC23Q5W5X9 447 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 IZUMO2Q6UXV1 221 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 P2RY8Q86VZ1 359 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 DEPDC4Q8N2C3 294 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 SLC22A24Q8N4F4 322 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 WDR31Q8NA23 367 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 BBS1Q8NFJ9 593 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 OR51L1Q8NGJ5 315 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 OR8J1Q8NGP2 316 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 TRUB1Q8WWH5 349 aaKnown RBP10.72□□□□□ -0.69
SHMT2-209ENST00000553949 HTRA1Q92743 480 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 UBE2FQ969M7 185 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 NABP1Q96AH0 204 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 OR51V1Q9H2C8 321 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 SIAEQ9HAT2 523 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 POLE4Q9NR33 117 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 SLC17A5Q9NRA2 495 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 IMPAD1Q9NX62 359 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 ZNF226Q9NYT6 803 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 ADGRG4Q8IZF6 3080 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 FREM1Q5H8C1 2179 aa10.72□□□□□ -0.69
SHMT2-209ENST00000553949 A0A1W2PR80 420 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 MPZL1O95297 269 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 FARS2O95363 451 aaKnown RBP10.71□□□□□ -0.69
SHMT2-209ENST00000553949 SCG5P05408 212 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 GAAP10253 952 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 HOXB1P14653 301 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-209ENST00000553949 MSR1P21757 451 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 SLC2A5P22732 501 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 CAPGP40121 348 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 UBE2NP61088 152 aaKnown RBP10.71□□□□□ -0.69
SHMT2-209ENST00000553949 HSF2Q03933 536 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 TAB1Q15750 504 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 SGCAQ16586 387 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 KLHL12Q53G59 568 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 FAM27BQ5VT28 67 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 C22orf34Q6ZV56 151 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 BCDIN3DQ7Z5W3 292 aaKnown RBP10.71□□□□□ -0.69
SHMT2-209ENST00000553949 SKA3Q8IX90 412 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 CCDC36Q8IYA8 594 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 SLC26A10Q8NG04 563 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 OR6K6Q8NGW6 343 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 OR52N5Q8NH56 324 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 LINC01560Q8TB33 94 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 C11orf40Q8WZ69 217 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 HSD17B8Q92506 261 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 TFAP2CQ92754 450 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 WFIKKN1Q96NZ8 548 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 SH3GL3Q99963 347 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 APOL4Q9BPW4 351 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 MED18Q9BUE0 208 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 RASSF4Q9H2L5 321 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 NDRG3Q9UGV2 375 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 MOKQ9UQ07 419 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 AMDHD2Q9Y303 409 aa10.71□□□□□ -0.69
SHMT2-209ENST00000553949 COL12A1Q99715 3063 aa10.71□□□□□ -0.7
SHMT2-209ENST00000553949 ARPC4-TTLL3A0A0A6YYG9 625 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 SH3D21A4FU49 640 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF503-AS2A6NEH8 195 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 PRODHO43272 600 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 GLCEO94923 617 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 CLIC3O95833 236 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 HLA-HP01893 362 aa10.7□□□□□ -0.7
SHMT2-209ENST00000553949 HLA-DQA2P01906 255 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms