RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SLC48A1Q6P1K1 146 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 SECTM1Q8WVN6 248 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 TSEN15Q8WW01 171 aaKnown RBP11.51□□□□□ -0.57
SMG8-202ENST00000543872 SLC25A21Q9BQT8 299 aaPredicted RBP11.51□□□□□ -0.57
SMG8-202ENST00000543872 MRI1Q9BV20 369 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 EDEM2Q9BV94 578 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 SEC61A2Q9H9S3 476 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 MSRAQ9UJ68 235 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 CBY1Q9Y3M2 126 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 CACNA1IQ9P0X4 2223 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 SCN5AQ14524 2016 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 CLDN4O14493 209 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 BRINP1O60477 761 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 LILRB5O75023 590 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 FBXO24O75426 580 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 ROBO4Q8WZ75 1007 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 CPNE4Q96A23 557 aaPredicted RBP11.51□□□□□ -0.57
SMG8-202ENST00000543872 FAM3DQ96BQ1 224 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 CASD1Q96PB1 797 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 MOGAT1Q96PD6 335 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 TOLLIPQ9H0E2 274 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 SYT4Q9H2B2 425 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 C1orf198Q9H425 327 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 FN3KRPQ9HA64 309 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 SRA1Q9HD15 236 aaKnown RBP11.51□□□□□ -0.57
SMG8-202ENST00000543872 FRRS1LQ9P0K9 344 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 ADAM29Q9UKF5 820 aa11.51□□□□□ -0.57
SMG8-202ENST00000543872 ADAMTS4O75173 837 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 MT-ND4LP03901 98 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 ACTBP60709 375 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 ACTG1P63261 375 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 BTN3A2P78410 334 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 CDNFQ49AH0 187 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 PPP1R3BQ86XI6 285 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 FOXRED2Q8IWF2 684 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 PLPP7Q8NBV4 271 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 ASB13Q8WXK3 278 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 MISP3Q96FF7 219 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 FAM83CQ9BQN1 747 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 TMED7Q9Y3B3 224 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 LATO43561 262 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 SRPX2O60687 465 aaPredicted RBP11.5□□□□□ -0.57
SMG8-202ENST00000543872 SLC34A2O95436 690 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 FOLR2P14207 255 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 PSMB6P28072 239 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 BCL6P41182 706 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 DHRS11Q6UWP2 260 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 RNF44Q7L0R7 432 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 ABHD13Q7L211 337 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 SEH1LQ96EE3 360 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 RRNAD1Q96FB5 475 aaKnown RBP11.5□□□□□ -0.57
SMG8-202ENST00000543872 PIGQQ9BRB3 760 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 OR52A5Q9H2C5 316 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 TMPRSS5Q9H3S3 457 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 RNF122Q9H9V4 155 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 KCNE5Q9UJ90 142 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 VSIG4Q9Y279 399 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 KLHDC2Q9Y2U9 406 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 AP4M1O00189 453 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 CDC40O60508 579 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMG8-202ENST00000543872 NGFRP08138 427 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 ITGA5P08648 1049 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 HOXC4P09017 264 aaPredicted RBP11.5□□□□□ -0.57
SMG8-202ENST00000543872 ITGA3P26006 1051 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 CCKBRP32239 447 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 SERPINF1P36955 418 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 LSSP48449 732 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 TRA2BP62995 288 aaKnown RBP11.5□□□□□ -0.57
SMG8-202ENST00000543872 PYY3Q5JQD4 70 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 IL34Q6ZMJ4 242 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 CCDC74AQ96AQ1 378 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 POM121Q96HA1 1249 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 PRDM7Q9NQW5 492 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 RXFP3Q9NSD7 469 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 SAGE1Q9NXZ1 904 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 LPAR3Q9UBY5 353 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 CA14Q9ULX7 337 aa11.5□□□□□ -0.57
SMG8-202ENST00000543872 A0A1B0GWA3 101 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 BTBD17A6NE02 478 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 LRP3O75074 770 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 AGAP20933 346 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 CAV2P51636 162 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 GAS6Q14393 721 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 TRMT12Q53H54 448 aaKnown RBP11.49□□□□□ -0.57
SMG8-202ENST00000543872 ABHD17CQ6PCB6 329 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 AMZ2Q86W34 360 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 MS4A6EQ96DS6 147 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 PHB2Q99623 299 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 ICAM5Q9UMF0 924 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 MSGN1A6NI15 193 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 CLEC3AO75596 197 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 NDUFB2O95178 105 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 LYPD3O95274 346 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 TACSTD2P09758 323 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 RCC1P18754 421 aaPredicted RBP11.49□□□□□ -0.57
SMG8-202ENST00000543872 ACKR3P25106 362 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 LPAR6P43657 344 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 RBP2P50120 134 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 RAB11BQ15907 218 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms