RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 C19orf24Q9BVV8 132 aa11.25□□□□□ -0.61
RTN3-212ENST00000543123 NKIRAS2Q9NYR9 191 aa11.25□□□□□ -0.61
RTN3-212ENST00000543123 MYEF2Q9P2K5 600 aaKnown RBP11.25□□□□□ -0.61
RTN3-212ENST00000543123 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 C17orf100A8MU93 164 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 PPIHO43447 177 aaKnown RBP11.24□□□□□ -0.61
RTN3-212ENST00000543123 TCF21O43680 179 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 TRMUO75648 421 aaKnown RBP11.24□□□□□ -0.61
RTN3-212ENST00000543123 TNFRSF1BP20333 461 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 KDELR2P33947 212 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 OR1E2P47887 323 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 SEC24CP53992 1094 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 MYBPC1Q00872 1141 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 ANKDD1AQ495B1 522 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 ALG10Q5BKT4 473 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 FAM209AQ5JX71 171 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 ARMC4Q5T2S8 1044 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 LRRC18Q8N456 261 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 ICA1LQ8NDH6 482 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 OR51F2Q8NH61 342 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 TPD52L3Q96J77 140 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 ZNF583Q96ND8 569 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 ALG12Q9BV10 488 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 NDEL1Q9GZM8 345 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 TXNIPQ9H3M7 391 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 SAR1AQ9NR31 198 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 ZNF275Q9NSD4 429 aaPredicted RBP11.24□□□□□ -0.61
RTN3-212ENST00000543123 C20orf141Q9NUB4 165 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 FGFR1OP2Q9NVK5 253 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 EIF3KQ9UBQ5 218 aaKnown RBP11.24□□□□□ -0.61
RTN3-212ENST00000543123 HIF3AQ9Y2N7 669 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 GRIP1Q9Y3R0 1128 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 CAPN7Q9Y6W3 813 aa11.24□□□□□ -0.61
RTN3-212ENST00000543123 PLSCR5A0PG75 271 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 ELOVL7A1L3X0 281 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 A6NIZ1 184 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 SHOX2O60902 331 aaPredicted RBP11.23□□□□□ -0.61
RTN3-212ENST00000543123 SLC2A10O95528 541 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 IFNW1P05000 195 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 MSMBP08118 114 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 MMP7P09237 267 aaPredicted RBP11.23□□□□□ -0.61
RTN3-212ENST00000543123 TSPAN19P0C672 248 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 CCL2P13500 99 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 ANPEPP15144 967 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 STOMP27105 288 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 GCH1P30793 250 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 GDI2P50395 445 aaKnown RBP11.23□□□□□ -0.61
RTN3-212ENST00000543123 RAP1BP61224 184 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 PCBD1P61457 104 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 RAP1AP62834 184 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 SELENOWP63302 87 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 RUNX1T1Q06455 604 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 PABPC1L2AQ5JQF8 200 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 THEM4Q5T1C6 240 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 SHQ1Q6PI26 577 aaKnown RBP11.23□□□□□ -0.61
RTN3-212ENST00000543123 RINLQ6ZS11 566 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 MICU2Q8IYU8 434 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 ALDH16A1Q8IZ83 802 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 PAQR4Q8N4S7 273 aaPredicted RBP11.23□□□□□ -0.61
RTN3-212ENST00000543123 CPEB3Q8NE35 698 aaKnown RBP11.23□□□□□ -0.61
RTN3-212ENST00000543123 OR1J1Q8NGS3 322 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 MOSPD2Q8NHP6 518 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 TMEM186Q96B77 213 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 BPIFA2Q96DR5 249 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 RBP7Q96R05 134 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 RACGAP1Q9H0H5 632 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 OR51B6Q9H340 312 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 DECR2Q9NUI1 292 aa11.23□□□□□ -0.61
RTN3-212ENST00000543123 CGGBP1Q9UFW8 167 aaPredicted RBP11.23□□□□□ -0.61
RTN3-212ENST00000543123 LOC100653049A0A140TA62 436 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 H3BSA7 217 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 TPD52L2O43399 206 aaKnown RBP11.22□□□□□ -0.61
RTN3-212ENST00000543123 RP2O75695 350 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 KRT34O76011 436 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 NCR1O76036 304 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 IGHV3-13P01766 116 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 IGHMP01871 453 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 IFI30P13284 250 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 CCNOP22674 350 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 COL8A2P25067 703 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 RPL27P61353 136 aaKnown RBP11.22□□□□□ -0.61
RTN3-212ENST00000543123 CCL8P80075 99 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 TOP3AQ13472 1001 aaPredicted RBP11.22□□□□□ -0.61
RTN3-212ENST00000543123 SGCAQ16586 387 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 ALKBH6Q3KRA9 238 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 ZNF718Q3SXZ3 478 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 ZMAT1Q5H9K5 638 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 ARL9Q6T311 187 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 OFCC1Q8IZS5 231 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 RAB39BQ96DA2 213 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 TIMD4Q96H15 378 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 FNDC11Q9BVV2 318 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 NARFLQ9H6Q4 476 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 SAP30LQ9HAJ7 183 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 CYSLTR2Q9NS75 346 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 HIF1ANQ9NWT6 349 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 UGT2A1Q9Y4X1 527 aa11.22□□□□□ -0.61
RTN3-212ENST00000543123 TRAV20A0A0B4J274 112 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms