RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 GNG8Q9UK08 70 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 FBXW11Q9UKB1 542 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 HELZP42694 1942 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 COL4A2P08572 1712 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CCDC187A0A096LP49 1063 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 A0A1B0GUS0 222 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TMEM129A0AVI4 362 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CDC14CA4D256 554 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 A6NJY4 79 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 FAM157AC9JC47 383 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 MKRN2OSH3BPM6 223 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SCDO00767 359 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 MATN3O15232 486 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 DOK2O60496 412 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PRAF2O60831 178 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 LILRA1O75019 489 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TRAPPC6AO75865 159 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CD3DP04234 171 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 IFNW1P05000 195 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ATP1B1P05026 303 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 RPLP1P05386 114 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZNF888P0CJ79 500 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 SAGP10523 405 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 RAG2P55895 527 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 NRG3P56975 720 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SOX8P57073 446 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CXADRP78310 365 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 NKX6-1P78426 367 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 HSD11B2P80365 405 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TUSC3Q13454 348 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 EIF2B1Q14232 305 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 GPNMBQ14956 572 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 EBPQ15125 230 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 NR0B2Q15466 257 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TOMM34Q15785 309 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 NKPD1Q17RQ9 610 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TP53I3Q53FA7 332 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 DCAF10Q5QP82 559 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 FBXW9Q5XUX1 488 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SZRD1Q7Z422 152 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 C17orf64Q86WR6 236 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 KMT5CQ86Y97 462 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 VRK3Q8IV63 474 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SLC35F3Q8IY50 421 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 LRRC56Q8IYG6 542 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 LYG1Q8N1E2 194 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZNF610Q8N9Z0 462 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SMRP1Q8NCR6 262 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PRSS33Q8NF86 280 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 OR2L8Q8NGY9 312 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 OR5W2Q8NH69 310 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SYNPRQ8TBG9 265 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CHTF18Q8WVB6 975 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SKA2Q8WVK7 121 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 DCUN1D4Q92564 292 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 GHSRQ92847 366 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 NEIL2Q969S2 332 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PLD4Q96BZ4 506 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 HMCESQ96FZ2 354 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 LMF1Q96S06 567 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SEMA3CQ99985 751 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 VPS25Q9BRG1 176 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SLC35A5Q9BS91 424 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 URM1Q9BTM9 101 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 EIF5A2Q9GZV4 153 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 SLC25A31Q9H0C2 315 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ATG10Q9H0Y0 220 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PARD6AQ9NPB6 346 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TMEM45AQ9NWC5 275 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 C5AR2Q9P296 337 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CBLCQ9ULV8 474 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 FARSAQ9Y285 508 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 NOP16Q9Y3C1 178 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 NPFFR2Q9Y5X5 522 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZNF320A2RRD8 509 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 C22orf46C9J442 243 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 UMAD1C9J7I0 102 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 M0R296 226 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TNFSF12O43508 249 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 KLK8O60259 260 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZNF821O75541 412 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 GIMD1P0DJR0 217 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CKBP12277 381 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PAX1P15863 534 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TUBG1P23258 451 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PYCR1P32322 319 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 GPR4P46093 362 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CAV2P51636 162 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PTTG1IPP53801 180 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 RIPPLY3P57055 190 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PLAURQ03405 335 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TCEA2Q15560 299 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CCSMST1Q4G0I0 132 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 MARC1Q5VT66 337 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 AADACL3Q5VUY0 350 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TANGO2Q6ICL3 276 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 FAM199XQ6PEV8 388 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 PRICKLE2Q7Z3G6 844 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SCN4BQ8IWT1 228 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TRAM1L1Q8N609 369 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms