RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 PABPC1L2AQ5JQF8 200 aa12.95□□□□□ -0.34
CSMD1-207ENST00000520451 ARMC4Q5T2S8 1044 aa12.95□□□□□ -0.34
CSMD1-207ENST00000520451 AVPI1Q5T686 147 aa12.95□□□□□ -0.34
CSMD1-207ENST00000520451 HDXQ7Z353 690 aa12.95□□□□□ -0.34
CSMD1-207ENST00000520451 OR8J3Q8NGG0 315 aa12.95□□□□□ -0.34
CSMD1-207ENST00000520451 GTF3AQ92664 365 aaKnown RBP12.95□□□□□ -0.34
CSMD1-207ENST00000520451 LRRC58Q96CX6 371 aa12.95□□□□□ -0.34
CSMD1-207ENST00000520451 TMEM120AQ9BXJ8 343 aa12.95□□□□□ -0.34
CSMD1-207ENST00000520451 SIAEQ9HAT2 523 aa12.95□□□□□ -0.34
CSMD1-207ENST00000520451 CCNB1IP1Q9NPC3 277 aa12.95□□□□□ -0.34
CSMD1-207ENST00000520451 STX18Q9P2W9 335 aaKnown RBP12.95□□□□□ -0.34
CSMD1-207ENST00000520451 IGHV1-69-2A0A0G2JMI3 117 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 MGRN1O60291 552 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 IGF2P01344 180 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 IFNA14P01570 189 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 MT-ND5P03915 603 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 ZNF133P52736 654 aaPredicted RBP12.94□□□□□ -0.34
CSMD1-207ENST00000520451 MVKQ03426 396 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 FMODQ06828 376 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 CD47Q08722 323 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 TOP3AQ13472 1001 aaPredicted RBP12.94□□□□□ -0.34
CSMD1-207ENST00000520451 SGCAQ16586 387 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 MOGQ16653 247 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 MMEL1Q495T6 779 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 ERICH5Q6P6B1 374 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.94□□□□□ -0.34
CSMD1-207ENST00000520451 CPEB3Q8NE35 698 aaKnown RBP12.94□□□□□ -0.34
CSMD1-207ENST00000520451 OR1J1Q8NGS3 322 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 NSMAFQ92636 917 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 HDAC2Q92769 488 aaKnown RBP12.94□□□□□ -0.34
CSMD1-207ENST00000520451 ZNF665Q9H7R5 613 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 DECR2Q9NUI1 292 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 NKIRAS2Q9NYR9 191 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 MED31Q9Y3C7 131 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 UGT2A1Q9Y4X1 527 aa12.94□□□□□ -0.34
CSMD1-207ENST00000520451 IGKV1D-43A0A0B4J1Z2 117 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 TRAV20A0A0B4J274 112 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 MRASO14807 208 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 PIP5K1CO60331 668 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 VENTXO95231 258 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 THRBP10828 461 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 NR2C1P13056 603 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 ZNF32P17041 273 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 STOMP27105 288 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 CRYBB2P43320 205 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 TEKQ02763 1124 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 SCGB2A2Q13296 93 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 LAPTM4AQ15012 233 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 TSTQ16762 297 aaKnown RBP12.93□□□□□ -0.34
CSMD1-207ENST00000520451 LRRC23Q53EV4 343 aaPredicted RBP12.93□□□□□ -0.34
CSMD1-207ENST00000520451 COQ5Q5HYK3 327 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 SPATA46Q5T0L3 261 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 FAHD2BQ6P2I3 314 aaPredicted RBP12.93□□□□□ -0.34
CSMD1-207ENST00000520451 THSD4Q6ZMP0 1018 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 USP51Q70EK9 711 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 MEX3DQ86XN8 651 aaKnown RBP12.93□□□□□ -0.34
CSMD1-207ENST00000520451 LIPHQ8WWY8 451 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 NABP1Q96AH0 204 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 NMD3Q96D46 503 aaKnown RBP12.93□□□□□ -0.34
CSMD1-207ENST00000520451 FAHD2AQ96GK7 314 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 TXNIPQ9H3M7 391 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 SAP30LQ9HAJ7 183 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 SMURF2Q9HAU4 748 aa12.93□□□□□ -0.34
CSMD1-207ENST00000520451 EIF3KQ9UBQ5 218 aaKnown RBP12.93□□□□□ -0.34
CSMD1-207ENST00000520451 A0A0A6YYJ9 748 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 C5orf49A4QMS7 147 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 GMNCA6NCL1 334 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 NPIPB13A6NJU9 1138 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 BBIP1A8MTZ0 92 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 NPIPB4C9JG80 1138 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 PNPP00491 289 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 IGHV3-13P01766 116 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 ANPEPP15144 967 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 GCH1P30793 250 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 WNT5AP41221 380 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 GDI2P50395 445 aaKnown RBP12.92□□□□□ -0.34
CSMD1-207ENST00000520451 ZNF81P51508 661 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 ZNF718Q3SXZ3 478 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 CYBRD1Q53TN4 286 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 ALG10Q5BKT4 473 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 ACSM5Q6NUN0 579 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 ZNF101Q8IZC7 436 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 SEMA6DQ8NFY4 1073 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 AKR7LQ8NHP1 331 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 C10orf82Q8WW14 230 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 RAB39BQ96DA2 213 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 TPD52L3Q96J77 140 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 POM121L2Q96KW2 1035 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 ZNF583Q96ND8 569 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 VIPAS39Q9H9C1 493 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 MRGBPQ9NV56 204 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 HIF3AQ9Y2N7 669 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 CACNG2Q9Y698 323 aa12.92□□□□□ -0.34
CSMD1-207ENST00000520451 LOC100509620A0A075B734 347 aa12.91□□□□□ -0.34
CSMD1-207ENST00000520451 FAM220BPB1ANY3 271 aa12.91□□□□□ -0.34
CSMD1-207ENST00000520451 CLDN25C9JDP6 229 aa12.91□□□□□ -0.34
CSMD1-207ENST00000520451 SPRY3O43610 288 aa12.91□□□□□ -0.34
CSMD1-207ENST00000520451 RGS9O75916 674 aaPredicted RBP12.91□□□□□ -0.34
CSMD1-207ENST00000520451 MPZL1O95297 269 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms