RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 NOL11Q9H8H0 719 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-216ENST00000519489 CDH20Q9HBT6 801 aa5.34□□□□□ -1.55
CTNNA1-216ENST00000519489 TAS2R7Q9NYW3 318 aa5.34□□□□□ -1.55
CTNNA1-216ENST00000519489 ZNF225Q9UK10 706 aa5.34□□□□□ -1.55
CTNNA1-216ENST00000519489 TMCC3Q9ULS5 477 aa5.34□□□□□ -1.55
CTNNA1-216ENST00000519489 CAB39Q9Y376 341 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-216ENST00000519489 SPIN1Q9Y657 262 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-216ENST00000519489 MUC2Q02817 5179 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 A6NDX4 124 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 CLDN24A6NM45 220 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 H3BNH8 94 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 RTL8CO15255 209 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 PCDH7O60245 1069 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 GLRA3O75311 464 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 BRI3O95415 125 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 DUX4L4P0CJ87 422 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 RBMY1CP0DJD4 496 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 STX2P32856 288 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 LSP1P33241 339 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 PGM1P36871 562 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 MYCNOSP40205 109 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 FNTAP49354 379 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 BNIP2Q12982 314 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 HSPB3Q12988 150 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 PSG7Q13046 419 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 CNN3Q15417 329 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 HAGHQ16775 308 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 ZNF718Q3SXZ3 478 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 VPS26BQ4G0F5 336 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 MTX3Q5HYI7 312 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 DCST2Q5T1A1 773 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 C9orf66Q5T8R8 295 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 FAM71E1Q6IPT2 247 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 ANKRD26P1Q6NSI1 321 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 WDR88Q6ZMY6 472 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 DCDC5Q6ZRR9 648 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 NLRC3Q7RTR2 1065 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 ZNF572Q7Z3I7 529 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 HMGN2P46Q86SG4 172 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 IGFN1Q86VF2 1251 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 Q8N1Y9 231 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 C11orf42Q8N5U0 333 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 PNLDC1Q8NA58 520 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 LY6G5BQ8NDX9 201 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 CIDECQ96AQ7 238 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 SH3GL3Q99963 347 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 SPATA25Q9BR10 227 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 ANP32EQ9BTT0 268 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 PRSS22Q9GZN4 317 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 HIPK2Q9H2X6 1198 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 ZCCHC4Q9H5U6 513 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 RNF121Q9H920 327 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 RAB18Q9NP72 206 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 A4GALTQ9NPC4 353 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 SIRT5Q9NXA8 310 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 PRR13Q9NZ81 148 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 KPTNQ9Y664 436 aa5.33□□□□□ -1.56
CTNNA1-216ENST00000519489 SORL1Q92673 2214 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 LOC100509620A0A075B734 347 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 A0A1B0GVI7 797 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 SEC14L6B5MCN3 397 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 ANKRD28O15084 1053 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 ZNF208O43345 1280 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 TRIM13O60858 407 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 PEX14O75381 377 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 UGT2B17O75795 530 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 CDK2AP2O75956 126 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 UBL3O95164 117 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 FSTL3O95633 263 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 CSTAP01040 98 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 S100BP04271 92 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 INHBAP08476 426 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 IFI6P09912 130 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 IGHV4-30-4P0DP06 118 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 PI3P19957 117 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 EFNA1P20827 205 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 IDH2P48735 452 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 ATP6V0D1P61421 351 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 RPL23AP62750 156 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 EWSR1Q01844 656 aaKnown RBP eCLIP5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 TAGLNQ01995 201 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 C2orf80Q0P641 193 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 ZNF141Q15928 474 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 PFKFB4Q16877 469 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 SMU1Q2TAY7 513 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 SPANXN3Q5MJ09 141 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 CD276Q5ZPR3 534 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 AP1ARQ63HQ0 302 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 LGALS9CQ6DKI2 356 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 DRICH1Q6PGQ1 229 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 LINC00336Q6ZUF6 198 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 OR2W3Q7Z3T1 314 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 CENPVQ7Z7K6 275 aaPredicted RBP5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 NAT8LQ8N9F0 302 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 OR51G2Q8NGK0 314 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 TUBGCP3Q96CW5 907 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 MS4A4EQ96PG1 132 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 ZNF347Q96SE7 839 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 FOXB1Q99853 325 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms