RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 PPP3CBP16298 524 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 HTR1FP30939 366 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 SORDQ00796 357 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 POU4F2Q12837 409 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 GGTLC2Q14390 218 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 PCK2Q16822 640 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 CEACAM16Q2WEN9 425 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 LINC01590Q5TEZ4 76 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 PLBD1Q6P4A8 553 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 MEPCEQ7L2J0 689 aaKnown RBP17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 LINGO2Q7L985 606 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 EGFL6Q8IUX8 553 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 CYB561A3Q8NBI2 242 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 STEAP2Q8NFT2 490 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 RNASE6Q93091 150 aaKnown RBP17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 ALKBH3Q96Q83 286 aaPredicted RBP17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 MNTQ99583 582 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 TEAD3Q99594 435 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 OPN3Q9H1Y3 402 aaPredicted RBP17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 KCNJ16Q9NPI9 418 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 PLCXD1Q9NUJ7 323 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 TMEM38BQ9NVV0 291 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 FREM1Q5H8C1 2179 aa17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 DCTN6O00399 190 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 CLDN14O95500 239 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 OR8G3PP0DMU2 310 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 IGHV1-2P23083 117 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 FMO3P31513 532 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 C6orf52Q5T4I8 152 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 RHOUQ7L0Q8 258 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 FAM169BQ8N8A8 192 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 SLC26A10Q8NG04 563 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 ZNF582Q96NG8 517 aaPredicted RBP17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 IL4I1Q96RQ9 567 aa17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 RBM24Q9BX46 236 aaKnown RBP17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 SRA1Q9HD15 236 aaKnown RBP17.35■□□□□ 0.37
SCAMP3-209ENST00000497470 ARPC4-TTLL3A0A0A6YYG9 625 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 IGKV1D-43A0A0B4J1Z2 117 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 H7C1C5 153 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 FARS2O95363 451 aaKnown RBP17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 GNAO1P09471 354 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 GAAP10253 952 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 MSR1P21757 451 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 LCN6P62502 163 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 IL5RAQ01344 420 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 FMODQ06828 376 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 STAC2Q6ZMT1 411 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 NCCRP1Q6ZVX7 275 aaPredicted RBP17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 PROKR2Q8NFJ6 384 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 OR1K1Q8NGR3 316 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 KISS1RQ969F8 398 aaPredicted RBP17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 YTHDF1Q9BYJ9 559 aaKnown RBP17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 POLE4Q9NR33 117 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 COA3Q9Y2R0 106 aaPredicted RBP17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 PCDHGB1Q9Y5G3 927 aa17.34■□□□□ 0.37
SCAMP3-209ENST00000497470 PCNX1Q96RV3 2341 aa17.33■□□□□ 0.37
SCAMP3-209ENST00000497470 IRGMA1A4Y4 181 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 FAM183AA6NL82 134 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 EEF1E1-BLOC1S5C9J1V9 151 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 EEF1E1O43324 174 aaKnown RBP17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 WBP4O75554 376 aaKnown RBP17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 CST2P09228 141 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 CDH11P55287 796 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 CDK5R2Q13319 367 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 GABRA6Q16445 453 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 TIMM23BQ5SRD1 257 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 SLC22A24Q8N4F4 322 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 BCL2L2Q92843 193 aaPredicted RBP17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 NABP1Q96AH0 204 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 TSSK2Q96PF2 358 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 HCAR1Q9BXC0 346 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 FBXL3Q9UKT7 428 aa17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 RPL36Q9Y3U8 105 aaKnown RBP17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 KLF2Q9Y5W3 355 aaPredicted RBP17.33■□□□□ 0.36
SCAMP3-209ENST00000497470 CCDC182A6NF36 153 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 C16orf97H3BN30 126 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 ZG16O60844 167 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 TMCC2O75069 709 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 IGHV3-9P01782 118 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 CCDC159P0C7I6 412 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 PCBD1P61457 104 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 ARF1P84077 181 aaKnown RBP17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 TFF3Q07654 80 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 MED21Q13503 144 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 APOFQ13790 326 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 C3orf36Q3SXR2 165 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 SHFQ7M4L6 423 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 OR9Q1Q8NGQ5 310 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 APH1BQ8WW43 257 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 NANOS1Q8WY41 292 aaKnown RBP17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 UBE2FQ969M7 185 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 ZNF837Q96EG3 531 aaPredicted RBP17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 MYCBPQ99417 103 aaPredicted RBP17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 OR51V1Q9H2C8 321 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 AMDHD2Q9Y303 409 aa17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 DIDO1Q9BTC0 2240 aaKnown RBP17.32■□□□□ 0.36
SCAMP3-209ENST00000497470 OR5H1A6NKK0 313 aa17.31■□□□□ 0.36
SCAMP3-209ENST00000497470 C12orf71A8MTZ7 269 aa17.31■□□□□ 0.36
SCAMP3-209ENST00000497470 ENTPD6O75354 484 aa17.31■□□□□ 0.36
SCAMP3-209ENST00000497470 CLIC3O95833 236 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms