RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RHCEP18577 417 aa21.5■■□□□ 1.03
HMGN1-217ENST00000489072 ERVK-25P63136 954 aa21.5■■□□□ 1.03
HMGN1-217ENST00000489072 FAM46AQ96IP4 442 aaKnown RBP21.5■■□□□ 1.03
HMGN1-217ENST00000489072 CDRT15Q96T59 188 aa21.5■■□□□ 1.03
HMGN1-217ENST00000489072 SYT3Q9BQG1 590 aa21.5■■□□□ 1.03
HMGN1-217ENST00000489072 DYNLRB1Q9NP97 96 aa21.5■■□□□ 1.03
HMGN1-217ENST00000489072 FZR1Q9UM11 496 aa21.5■■□□□ 1.03
HMGN1-217ENST00000489072 ADAM18Q9Y3Q7 739 aa21.5■■□□□ 1.03
HMGN1-217ENST00000489072 FAM32AQ9Y421 112 aaKnown RBP21.5■■□□□ 1.03
HMGN1-217ENST00000489072 MALRD1Q5VYJ5 2156 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 TRBV4-1A0A0J9YWV2 114 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 GMNNO75496 209 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 DCTN3O75935 186 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 SEMG1P04279 462 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 NR2C1P13056 603 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 EVX1P49640 407 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 RPS23P62266 143 aaKnown RBP21.49■■□□□ 1.03
HMGN1-217ENST00000489072 SEC23BQ15437 767 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 CARTPTQ16568 116 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 SGCAQ16586 387 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 ZBED5Q49AG3 693 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 FGD3Q5JSP0 725 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 THEM4Q5T1C6 240 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 FAM205BPQ63HN1 556 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 RRM2BQ7LG56 351 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 PRIMA1Q86XR5 153 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 ARIH2OSQ8N7S6 290 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 DHRS1Q96LJ7 313 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 FOXN4Q96NZ1 517 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 RBP7Q96R05 134 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 YAE1D1Q9NRH1 226 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 MYEF2Q9P2K5 600 aaKnown RBP21.49■■□□□ 1.03
HMGN1-217ENST00000489072 MAGEL2Q9UJ55 1249 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 TMEM5Q9Y2B1 443 aa21.49■■□□□ 1.03
HMGN1-217ENST00000489072 A6NIZ1 184 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 H7C1C5 153 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 NDUFS8O00217 210 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 TLX2O43763 284 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-217ENST00000489072 MGRN1O60291 552 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 FAM157BP0CG42 384 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 USF1P22415 310 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-217ENST00000489072 NR4A2P43354 598 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 LIMS1P48059 325 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 RAP1BP61224 184 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 LCN6P62502 163 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 RAP1AP62834 184 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 PABPC1L2AQ5JQF8 200 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 SAMD4BQ5PRF9 694 aaKnown RBP21.48■■□□□ 1.03
HMGN1-217ENST00000489072 CPEB3Q8NE35 698 aaKnown RBP21.48■■□□□ 1.03
HMGN1-217ENST00000489072 NEU4Q8WWR8 484 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-217ENST00000489072 PIMREGQ9BSJ6 248 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 FUZQ9BT04 418 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 TPK1Q9H3S4 243 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 C1orf198Q9H425 327 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 CDH20Q9HBT6 801 aa21.48■■□□□ 1.03
HMGN1-217ENST00000489072 MYOZ1Q9NP98 299 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-217ENST00000489072 LOC390937A0A1W2PQ73 354 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 ARPC2O15144 300 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 SYNGR3O43761 229 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 PTP4A3O75365 173 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 CRLF1O75462 422 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 SNAP29O95721 258 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 CD14P08571 375 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 ZNF32P17041 273 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 APEX1P27695 318 aaKnown RBP21.47■■□□□ 1.03
HMGN1-217ENST00000489072 RPL4P36578 427 aaKnown RBP21.47■■□□□ 1.03
HMGN1-217ENST00000489072 OMPP47874 163 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 PLP2Q04941 152 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 FOXL2NBQ6ZUU3 175 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 FNDC8Q8TC99 324 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 PYURFQ96I23 114 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 Q96M85 177 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 OR51B6Q9H340 312 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 SIGLEC7Q9Y286 467 aa21.47■■□□□ 1.03
HMGN1-217ENST00000489072 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.46■■□□□ 1.034e-11■■■■■ 27.3
HMGN1-217ENST00000489072 IQCMA0A1B0GVH7 501 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 DAOP14920 347 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 ALDH3B1P43353 468 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 ERVS71-1P61550 626 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 HSF2Q03933 536 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 GGTLC2Q14390 218 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 MAD2L1BPQ15013 274 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-217ENST00000489072 TBC1D28Q2M2D7 210 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 MESTQ5EB52 335 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 FAM27BQ5VT28 67 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 FAM122BQ7Z309 247 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 DEFB107AQ8IZN7 70 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 OR52J3Q8NH60 311 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 CCT8L2Q96SF2 557 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 KCNN2Q9H2S1 579 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 CCNB1IP1Q9NPC3 277 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 REV1Q9UBZ9 1251 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 ADAM21Q9UKJ8 722 aa21.46■■□□□ 1.03
HMGN1-217ENST00000489072 IGHV4-61A0A0C4DH41 118 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 M0R233 179 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 STAMBPO95630 424 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 PTHP01270 115 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 ERCC1P07992 297 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-217ENST00000489072 IGHV4-31P0DP07 118 aa21.45■■□□□ 1.02
HMGN1-217ENST00000489072 LAP3P28838 519 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms