RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 AGAP6Q5VW22 663 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 SHEQ5VZ18 495 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 CCDC121Q6ZUS5 278 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 IGFN1Q86VF2 1251 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 FANK1Q8TC84 345 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 GTPBP3Q969Y2 492 aaKnown RBP13.44□□□□□ -0.26
C9orf3-217ENST00000479161 NABP1Q96AH0 204 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 KCNN2Q9H2S1 579 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 ZNF442Q9H7R0 627 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 ARMC1Q9NVT9 282 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 DNAJB9Q9UBS3 223 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 CDH10Q9Y6N8 788 aa13.44□□□□□ -0.26
C9orf3-217ENST00000479161 HIVEP1P15822 2718 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 F8P00451 2351 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 TEX13CA0A0J9YWL9 993 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 ERICH4A6NGS2 130 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 FKBP6O75344 327 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 RAB36O95755 333 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 CST2P09228 141 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 MMP7P09237 267 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-217ENST00000479161 CD79AP11912 226 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 ZNF35P13682 527 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 CRABP1P29762 137 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 APOBEC3AP31941 199 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-217ENST00000479161 TTKP33981 857 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 ZSCAN26Q16670 478 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 TMEM53Q6P2H8 277 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 SLC16A14Q7RTX9 510 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 OR9Q2Q8NGE9 314 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 SLCO4A1Q96BD0 722 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 TRAF4Q9BUZ4 470 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-217ENST00000479161 VNN3Q9NY84 501 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 POU2F3Q9UKI9 436 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 MOKQ9UQ07 419 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 BAIAP2Q9UQB8 552 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 IER3IP1Q9Y5U9 82 aa13.43□□□□□ -0.26
C9orf3-217ENST00000479161 MED13LQ71F56 2210 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 IGKV1D-43A0A0B4J1Z2 117 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 IGHV2OR16-5A0A0B4J2B6 119 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 VSTM5A8MXK1 200 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 SMPD2O60906 423 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 DEAF1O75398 565 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-217ENST00000479161 SEC14L2O76054 403 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 SLC2A10O95528 541 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 SNAP29O95721 258 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 CAPZA2P47755 286 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 GIPRP48546 466 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 IDH3GP51553 393 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-217ENST00000479161 PCBD1P61457 104 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 LSM6P62312 80 aaKnown RBP13.42□□□□□ -0.26
C9orf3-217ENST00000479161 TUBA1BP68363 451 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 TUBA4AP68366 448 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 MYBPC1Q00872 1141 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 ETFDHQ16134 617 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 KCNMB1Q16558 191 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 DNM1P34Q6PK57 102 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 TUBA1AQ71U36 451 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 FBXL14Q8N1E6 418 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 AQP11Q8NBQ7 271 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 OR52L1Q8NGH7 329 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 GIPC3Q8TF64 312 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 DNAJC9Q8WXX5 260 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 NEUROG1Q92886 237 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 ERMAPQ96PL5 475 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-217ENST00000479161 CBLN4Q9NTU7 201 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 SPEF1Q9Y4P9 236 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 U3KQV3 271 aa13.42□□□□□ -0.26
C9orf3-217ENST00000479161 ATP6V1G2-DDX39BF2Z307 99 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 BHLHE40O14503 412 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 GNGT2O14610 69 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 KHDRBS3O75525 346 aaKnown RBP13.41□□□□□ -0.26
C9orf3-217ENST00000479161 CD8AP01732 235 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 SOD3P08294 240 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 BMP4P12644 408 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 ANXA8P13928 327 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 MSR1P21757 451 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 CDKN2AP42771 156 aaKnown RBP13.41□□□□□ -0.26
C9orf3-217ENST00000479161 ARHGDIAP52565 204 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 NKX6-1P78426 367 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-217ENST00000479161 FMODQ06828 376 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 SPOCK1Q08629 439 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 EFNB3Q15768 340 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 C1orf146Q5VVC0 180 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 C11orf71Q6IPW1 123 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 B3GLCTQ6Y288 498 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 ZNF584Q8IVC4 421 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 GLB1L2Q8IW92 636 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 C1orf174Q8IYL3 243 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 MUC15Q8N387 334 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 LNX2Q8N448 690 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 OR10G2Q8NGC3 310 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 OR1J2Q8NGS2 313 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 UTP4Q969X6 686 aaKnown RBP13.41□□□□□ -0.26
C9orf3-217ENST00000479161 RASD2Q96D21 266 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 SAMD8Q96LT4 415 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 FEVQ99581 238 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 SH3GL3Q99963 347 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 RACGAP1Q9H0H5 632 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 NOX3Q9HBY0 568 aa13.41□□□□□ -0.26
C9orf3-217ENST00000479161 POLE4Q9NR33 117 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms