RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CLDND2Q8NHS1 167 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 TMEM255BQ8WV15 326 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 LIPHQ8WWY8 451 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 TMEM186Q96B77 213 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 RBP7Q96R05 134 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF347Q96SE7 839 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 PRSS27Q9BQR3 290 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 ALG12Q9BV10 488 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 MRPL13Q9BYD1 178 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 KRTAP3-3Q9BYR6 98 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 KRTAP3-2Q9BYR7 98 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 CYSLTR2Q9NS75 346 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF275Q9NSD4 429 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 A6NIZ1 184 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 FAM220BPB1ANY3 271 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 CLDN25C9JDP6 229 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 H3BSA7 217 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 FBP2O00757 339 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 TRMUO75648 421 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 AQP2P41181 271 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 GDI2P50395 445 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 GZMMP51124 257 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF133P52736 654 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 ARFIP2P53365 341 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 RAP1BP61224 184 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 RAP1AP62834 184 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 MYBPC1Q00872 1141 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 MSMPQ1L6U9 139 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 ALG10Q5BKT4 473 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 CALHM3Q86XJ0 350 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 WDFY1Q8IWB7 410 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 LRRC18Q8N456 261 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 OR2T12Q8NG77 320 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 PFN4Q8NHR9 129 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 PRRC1Q96M27 445 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 TXNIPQ9H3M7 391 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 NARFLQ9H6Q4 476 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 SAP30LQ9HAJ7 183 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 HIF1ANQ9NWT6 349 aa12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 MYEF2Q9P2K5 600 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-209ENST00000478349 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.431e-10■■■■□ 23.8
SMARCE1-209ENST00000478349 IGHV1-69-2A0A0G2JMI3 117 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 SLC22A2O15244 555 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 GAAP10253 952 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 CCNOP22674 350 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 STOMP27105 288 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 LIPAP38571 399 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 CCL8P80075 99 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 SLC3A1Q07837 685 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 PIN1Q13526 163 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 HFEQ30201 348 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF718Q3SXZ3 478 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 CYBRD1Q53TN4 286 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 PABPC1L2AQ5JQF8 200 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 THEM4Q5T1C6 240 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 ARMC4Q5T2S8 1044 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 ZER1Q7Z7L7 766 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 NKAIN4Q8IVV8 208 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 OR1J1Q8NGS3 322 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 FGFBP3Q8TAT2 258 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF418Q8TF45 676 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 ZFAND2BQ8WV99 257 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 C10orf82Q8WW14 230 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 RAB1CQ92928 201 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 ELMOD3Q96FG2 381 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 TPD52L3Q96J77 140 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 EGLN1Q9GZT9 426 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 RACGAP1Q9H0H5 632 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 OR51B6Q9H340 312 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 HIF3AQ9Y2N7 669 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 CAPN7Q9Y6W3 813 aa12.36□□□□□ -0.43
SMARCE1-209ENST00000478349 ELOVL7A1L3X0 281 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 FXYD1O00168 92 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 RP2O75695 350 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 NCR1O76036 304 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 IGHV3-13P01766 116 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 IFNW1P05000 195 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 MMP7P09237 267 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 CCL2P13500 99 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 COL8A2P25067 703 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 KDELR2P33947 212 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 CRYBB2P43320 205 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF81P51508 661 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 ARHGDIAP52565 204 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 CRYBA2P53672 197 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 RPL27P61353 136 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 RUNX1T1Q06455 604 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 KLF10Q13118 480 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 TOP3AQ13472 1001 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 SGCAQ16586 387 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 ALKBH6Q3KRA9 238 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 ACSM5Q6NUN0 579 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 PEG10Q86TG7 708 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 TSPYL5Q86VY4 417 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 BPIFA2Q96DR5 249 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 LRRC37BQ96QE4 947 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 DIRC2Q96SL1 478 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 WACQ9BTA9 647 aa12.35□□□□□ -0.43
SMARCE1-209ENST00000478349 FNDC11Q9BVV2 318 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms