RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CD47Q08722 323 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 ZBED5Q49AG3 693 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 FAM27BQ5VT28 67 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 PODNL1Q6PEZ8 512 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 FAM86B1Q8N7N1 296 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 ARIH2OSQ8N7S6 290 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 SLC30A7Q8NEW0 376 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 OR13C2Q8NGS9 318 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 PYURFQ96I23 114 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 FUZQ9BT04 418 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 MRPL37Q9BZE1 423 aaKnown RBP18.73■□□□□ 0.59
COL9A3-211ENST00000477612 RNF121Q9H920 327 aa18.73■□□□□ 0.59
COL9A3-211ENST00000477612 SONP18583 2426 aaKnown RBP18.72■□□□□ 0.59
COL9A3-211ENST00000477612 LOC390937A0A1W2PQ73 354 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 TP53P04637 393 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-211ENST00000477612 CD14P08571 375 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 ZNF26P17031 533 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-211ENST00000477612 PCSK6P29122 969 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 GPR4P46093 362 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 LIMS1P48059 325 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 TOP3AQ13472 1001 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-211ENST00000477612 FAM122BQ7Z309 247 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 IGFN1Q86VF2 1251 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 CDRT15Q96T59 188 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 NDE1Q9NXR1 346 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 SIGLEC7Q9Y286 467 aa18.72■□□□□ 0.59
COL9A3-211ENST00000477612 SYNGR3O43761 229 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 AHCYL1O43865 530 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 ITGA2P17301 1181 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 TCN1P20061 433 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-211ENST00000477612 CDAP32320 146 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 OMPP47874 163 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 KRT72Q14CN4 511 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 TMEM249Q2WGJ8 235 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 C16orf89Q6UX73 402 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 LRRC18Q8N456 261 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 OR1J2Q8NGS2 313 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 KCNN2Q9H2S1 579 aa18.71■□□□□ 0.59
COL9A3-211ENST00000477612 IQCMA0A1B0GVH7 501 aa18.7■□□□□ 0.58
COL9A3-211ENST00000477612 CRLF1O75462 422 aa18.7■□□□□ 0.58
COL9A3-211ENST00000477612 USF1P22415 310 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-211ENST00000477612 NR4A2P43354 598 aa18.7■□□□□ 0.58
COL9A3-211ENST00000477612 PLP2Q04941 152 aa18.7■□□□□ 0.58
COL9A3-211ENST00000477612 TBC1D28Q2M2D7 210 aa18.7■□□□□ 0.58
COL9A3-211ENST00000477612 GKAP1Q5VSY0 366 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-211ENST00000477612 ZCCHC24Q8N2G6 241 aaKnown RBP18.7■□□□□ 0.58
COL9A3-211ENST00000477612 PAQR4Q8N4S7 273 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-211ENST00000477612 CLDN22Q8N7P3 220 aa18.7■□□□□ 0.58
COL9A3-211ENST00000477612 NSMAFQ92636 917 aa18.7■□□□□ 0.58
COL9A3-211ENST00000477612 FAM46AQ96IP4 442 aaKnown RBP18.7■□□□□ 0.58
COL9A3-211ENST00000477612 CCT8L2Q96SF2 557 aa18.7■□□□□ 0.58
COL9A3-211ENST00000477612 GPX7Q96SL4 187 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-211ENST00000477612 MS4A5Q9H3V2 200 aa18.7■□□□□ 0.58
COL9A3-211ENST00000477612 MALRD1Q5VYJ5 2156 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 TRBV4-1A0A0J9YWV2 114 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 ERCC1P07992 297 aaPredicted RBP18.69■□□□□ 0.58
COL9A3-211ENST00000477612 CST2P09228 141 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 ZNF32P17041 273 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 GIFP27352 417 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 MNAT1P51948 309 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 ERVK-25P63136 954 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 SEC23BQ15437 767 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 DEFB107AQ8IZN7 70 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 FITM2Q8N6M3 262 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 ZNF540Q8NDQ6 660 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 CPEB3Q8NE35 698 aaKnown RBP18.69■□□□□ 0.58
COL9A3-211ENST00000477612 NSMCE2Q96MF7 247 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 FOXN4Q96NZ1 517 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 PIMREGQ9BSJ6 248 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 WACQ9BTA9 647 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 LRMDAQ9H2I8 198 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 CDH20Q9HBT6 801 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 DYNLRB1Q9NP97 96 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 NRIP3Q9NQ35 241 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 GRHPRQ9UBQ7 328 aa18.69■□□□□ 0.58
COL9A3-211ENST00000477612 ABCA2Q9BZC7 2435 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 SH3PXD2BA1X283 911 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 M0R233 179 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 DYNC1I1O14576 645 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 ARPC2O15144 300 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 DIRAS1O95057 198 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 NDUFB2O95178 105 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 STAMBPO95630 424 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 ADRA2AP08913 450 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 CCL2P13500 99 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 ZNF250P15622 560 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 MSX2P35548 267 aaPredicted RBP18.68■□□□□ 0.58
COL9A3-211ENST00000477612 RPL4P36578 427 aaKnown RBP18.68■□□□□ 0.58
COL9A3-211ENST00000477612 RAD52P43351 418 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 UCP2P55851 309 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 SMIM11AP58511 58 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 SGCAQ16586 387 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 PABPC1L2AQ5JQF8 200 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 FGD3Q5JSP0 725 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 RGS7BPQ6MZT1 257 aaPredicted RBP18.68■□□□□ 0.58
COL9A3-211ENST00000477612 SYT9Q86SS6 491 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 LRP11Q86VZ4 500 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 ZNF786Q8N393 782 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 POM121L2Q96KW2 1035 aa18.68■□□□□ 0.58
COL9A3-211ENST00000477612 Q96M85 177 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms