RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 RAB9BQ9NP90 201 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PRSS16Q9NQE7 514 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 NIT2Q9NQR4 276 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 DYRK4Q9NR20 520 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ACOXLQ9NUZ1 547 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 NECAP2Q9NVZ3 263 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GSKIPQ9P0R6 139 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 RNF14Q9UBS8 474 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ZNF282Q9UDV7 671 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 CNOT8Q9UFF9 292 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 OR12D3Q9UGF7 316 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ZNF225Q9UK10 706 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 EMCNQ9ULC0 261 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 SLC7A11Q9UPY5 501 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PIGLQ9Y2B2 252 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 KCNIP3Q9Y2W7 256 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 UTP11Q9Y3A2 253 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 TMEM184BQ9Y519 407 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 PTPRUQ92729 1446 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ZNF532Q9HCE3 1301 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 AQRO60306 1485 aaKnown RBP eCLIP2.13□□□□□ -2.07
XRN1-211ENST00000477237 GOLGA3Q08378 1498 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 MBD5Q9P267 1494 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 A0A1W2PP64 1363 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 USP47Q96K76 1375 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 EIF4G3O43432 1585 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 TRAPPC8Q9Y2L5 1435 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TRBV11-1A0A0K0K1C0 115 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 A0A1W2PP11 408 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 VPS37CA5D8V6 355 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 ANKRD30BLA7E2S9 258 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 DISC1C4P0D8 188 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ANHXE9PGG2 379 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 G3V3Y1 287 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 M0QZ24 198 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CXCR6O00574 342 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 BHLHE40O14503 412 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SDHDO14521 159 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TRAFD1O14545 582 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 RFXANKO14593 260 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ZBTB5O15062 677 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 MAGEB4O15481 346 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 RAD51DO75771 328 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SLC22A5O76082 557 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SCELO95171 688 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TDP2O95551 362 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TSPAN12O95859 305 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 FGGP02679 453 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 DCNP07585 359 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 APRTP07741 180 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 METTL15P1P0C7V9 234 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SMIM18P0DKX4 95 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 UCHL3P15374 230 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 NCK1P16333 377 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 MMP11P24347 488 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ATP5A1P25705 553 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 STOMP27105 288 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CASP1P29466 404 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 RBMS1P29558 406 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 GNRHRP30968 328 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SSTR5P35346 364 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ACVR1BP36896 505 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 VHLP40337 213 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CD200P41217 278 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 BRCC3P46736 316 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 PRELPP51888 382 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 EFNA3P52797 238 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CDH11P55287 796 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 KCNK10P57789 538 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CD81P60033 236 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 RAP1AP62834 184 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 DLK1P80370 383 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 FAM3AP98173 230 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 FOLH1Q04609 750 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 EMX2Q04743 252 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CKAP4Q07065 602 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 ZP4Q12836 540 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CNTN1Q12860 1018 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SRSF6Q13247 344 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 RAB31Q13636 194 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 FASTKQ14296 549 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 GK2Q14410 553 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 NECTIN1Q15223 517 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 UGCGQ16739 394 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 PGGHGQ32M88 737 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ZNF528Q3MIS6 628 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 POM121L1PQ3SYA9 428 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 C6orf226Q5I0X4 101 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 PABPC1L2AQ5JQF8 200 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 GCSAMLQ5JQS6 135 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 FGD3Q5JSP0 725 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SPIN3Q5JUX0 258 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 DCAF10Q5QP82 559 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 PPM1LQ5SGD2 360 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 C6orf141Q5SZD1 244 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 N4BP2L1Q5TBK1 243 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 TRIQKQ629K1 86 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SAXO2Q658L1 398 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TMEM42Q69YG0 159 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TXNRD3NBQ6F5E7 133 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms