RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 CDC42EP2O14613 210 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 PTHP01270 115 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 ERCC1P07992 297 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-204ENST00000469443 MMP7P09237 267 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-204ENST00000469443 TCN1P20061 433 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-204ENST00000469443 CDAP32320 146 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 RAP1BP61224 184 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 RAP1AP62834 184 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 PLP2Q04941 152 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 DGCR6Q14129 220 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 TMEM249Q2WGJ8 235 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 ZBED5Q49AG3 693 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 SAMD4BQ5PRF9 694 aaKnown RBP15.74■□□□□ 0.11
PHGDH-204ENST00000469443 THEM4Q5T1C6 240 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 FAM86B1Q8N7N1 296 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 NSMAFQ92636 917 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 NABP1Q96AH0 204 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 PIMREGQ9BSJ6 248 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 KCNN2Q9H2S1 579 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 CDH20Q9HBT6 801 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 MAGEL2Q9UJ55 1249 aa15.74■□□□□ 0.11
PHGDH-204ENST00000469443 IQCMA0A1B0GVH7 501 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 SLC22A23A1A5C7 686 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 SYNGR3O43761 229 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 IGFBP1P08833 259 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-204ENST00000469443 USF1P22415 310 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-204ENST00000469443 VLDLRP98155 873 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 CARTPTQ16568 116 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 TBC1D28Q2M2D7 210 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 FGD3Q5JSP0 725 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 PODNL1Q6PEZ8 512 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 ZCCHC24Q8N2G6 241 aaKnown RBP15.73■□□□□ 0.11
PHGDH-204ENST00000469443 CLDN22Q8N7P3 220 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 ARIH2OSQ8N7S6 290 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 OR1J2Q8NGS2 313 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 CDRT15Q96T59 188 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 NDEL1Q9GZM8 345 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 CD300AQ9UGN4 299 aa15.73■□□□□ 0.11
PHGDH-204ENST00000469443 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.73■□□□□ 0.11
PHGDH-204ENST00000469443 M0R233 179 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 DIRAS1O95057 198 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 SNAP29O95721 258 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 CD14P08571 375 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 ADRA2AP08913 450 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 CCL2P13500 99 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 ITGA2P17301 1181 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 RPL4P36578 427 aaKnown RBP15.72■□□□□ 0.11
PHGDH-204ENST00000469443 NR4A2P43354 598 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 ERVK-25P63136 954 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 HSF2Q03933 536 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 KRT72Q14CN4 511 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 SGCAQ16586 387 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 C16orf89Q6UX73 402 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 PAQR4Q8N4S7 273 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-204ENST00000469443 PYURFQ96I23 114 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 FAM46AQ96IP4 442 aaKnown RBP15.72■□□□□ 0.11
PHGDH-204ENST00000469443 DHRS1Q96LJ7 313 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 FOXN4Q96NZ1 517 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 SYT3Q9BQG1 590 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 LRMDAQ9H2I8 198 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 CCNB1IP1Q9NPC3 277 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 YAE1D1Q9NRH1 226 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 NDE1Q9NXR1 346 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 GRHPRQ9UBQ7 328 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 V9GYQ6 96 aa15.72■□□□□ 0.11
PHGDH-204ENST00000469443 CRLF1O75462 422 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 DAOP14920 347 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 ZNF26P17031 533 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-204ENST00000469443 ZNF32P17041 273 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 APEX1P27695 318 aaKnown RBP15.71■□□□□ 0.11
PHGDH-204ENST00000469443 LIMS1P48059 325 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 IQCCQ4KMZ1 466 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 PABPC1L2AQ5JQF8 200 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 FAM27BQ5VT28 67 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 RGS7BPQ6MZT1 257 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-204ENST00000469443 FOXL2NBQ6ZUU3 175 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 LRP11Q86VZ4 500 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 NSMCE2Q96MF7 247 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 MS4A5Q9H3V2 200 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 REV1Q9UBZ9 1251 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 FZR1Q9UM11 496 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 ADAM18Q9Y3Q7 739 aa15.71■□□□□ 0.11
PHGDH-204ENST00000469443 TRBV4-1A0A0J9YWV2 114 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 ARPC2O15144 300 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 NDUFB2O95178 105 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 STAMBPO95630 424 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 SEMG1P04279 462 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 FAM157BP0CG42 384 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 APLNRP35414 380 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 MSX2P35548 267 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-204ENST00000469443 GUCA1AP43080 201 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-204ENST00000469443 OMPP47874 163 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 MXRA7P84157 204 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 GGTLC2Q14390 218 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 C6orf52Q5T4I8 152 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 FAM122BQ7Z309 247 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 DEFB107AQ8IZN7 70 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 ZNF540Q8NDQ6 660 aa15.7■□□□□ 0.1
PHGDH-204ENST00000469443 CPEB3Q8NE35 698 aaKnown RBP15.7■□□□□ 0.1
PHGDH-204ENST00000469443 OR52J3Q8NH60 311 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms