RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SEPHS2Q99611 448 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 FNDC11Q9BVV2 318 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 TXNIPQ9H3M7 391 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 GPR160Q9UJ42 338 aa18.68■□□□□ 0.58
TTC28-204ENST00000468807 SLC22A2O15244 555 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 IFNW1P05000 195 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 COL8A2P25067 703 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 RAD52P43351 418 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 GPR6P46095 362 aaPredicted RBP18.67■□□□□ 0.58
TTC28-204ENST00000468807 LIPEQ05469 1076 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 PABPC1L2AQ5JQF8 200 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 C10orf128Q5T292 105 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 RP9Q8TA86 221 aaKnown RBP18.67■□□□□ 0.58
TTC28-204ENST00000468807 SNX33Q8WV41 574 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 C11orf40Q8WZ69 217 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 RDH5Q92781 318 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 TSPAN32Q96QS1 320 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 SIAEQ9HAT2 523 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 HIF3AQ9Y2N7 669 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 AP3M1Q9Y2T2 418 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 FBN3Q75N90 2809 aa18.67■□□□□ 0.58
TTC28-204ENST00000468807 IGKV1D-43A0A0B4J1Z2 117 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 J3KTA2 159 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 MMP7P09237 267 aaPredicted RBP18.66■□□□□ 0.58
TTC28-204ENST00000468807 NR2C1P13056 603 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 MAGEB1P43366 347 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 UCP2P55851 309 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 CTXN1P60606 82 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 MRPS34P82930 218 aaKnown RBP18.66■□□□□ 0.58
TTC28-204ENST00000468807 TMEM154Q6P9G4 183 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 NRMQ8IXM6 262 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 OR51A7Q8NH64 312 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 ZNF519Q8TB69 540 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 CCDC134Q9H6E4 229 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 SNX13Q9Y5W8 968 aa18.66■□□□□ 0.58
TTC28-204ENST00000468807 TRAV27A0A087WT01 109 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 CXCR6O00574 342 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 PPIHO43447 177 aaKnown RBP18.65■□□□□ 0.58
TTC28-204ENST00000468807 NCR1O76036 304 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 SNAP29O95721 258 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 TSPAN19P0C672 248 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 COX4I1P13073 169 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 ZNF32P17041 273 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 MAKP20794 623 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 DRD4P21917 467 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 FUT4P22083 530 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 ACHEP22303 614 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 SLC7A2P52569 658 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 ZNF133P52736 654 aaPredicted RBP18.65■□□□□ 0.58
TTC28-204ENST00000468807 RPL27P61353 136 aaKnown RBP18.65■□□□□ 0.58
TTC28-204ENST00000468807 ERVK-25P63136 954 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 SRSF2Q01130 221 aaKnown RBP18.65■□□□□ 0.58
TTC28-204ENST00000468807 GLO1Q04760 184 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 TRAM2Q15035 370 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 FKBP9P1Q75LS8 142 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 SLC15A3Q8IY34 581 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 OFCC1Q8IZS5 231 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 CLDN22Q8N7P3 220 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 CPEB3Q8NE35 698 aaKnown RBP18.65■□□□□ 0.58
TTC28-204ENST00000468807 OR1J1Q8NGS3 322 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 GEMIN6Q8WXD5 167 aaKnown RBP18.65■□□□□ 0.58
TTC28-204ENST00000468807 RBP7Q96R05 134 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 BCL2L14Q9BZR8 327 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 SMURF2Q9HAU4 748 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 HINT3Q9NQE9 182 aaKnown RBP18.65■□□□□ 0.58
TTC28-204ENST00000468807 ZNF275Q9NSD4 429 aaPredicted RBP18.65■□□□□ 0.58
TTC28-204ENST00000468807 UGT2A1Q9Y4X1 527 aa18.65■□□□□ 0.58
TTC28-204ENST00000468807 GMNCA6NCL1 334 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 NPIPB13A6NJU9 1138 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 EFCAB9A8MZ26 197 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 NPIPB4C9JG80 1138 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 TPD52L2O43399 206 aaKnown RBP18.64■□□□□ 0.57
TTC28-204ENST00000468807 ZNF250P15622 560 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 STOMP27105 288 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 SRP14P37108 136 aaKnown RBP18.64■□□□□ 0.57
TTC28-204ENST00000468807 CDH15P55291 814 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 TAF11Q15544 211 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 IFI44LQ53G44 452 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 UGT2A3Q6UWM9 527 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 ZNF730Q6ZMV8 503 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 OAFQ86UD1 273 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 AKR7LQ8NHP1 331 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 YIPF5Q969M3 257 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 NABP1Q96AH0 204 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 ALG12Q9BV10 488 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 SLCO1C1Q9NYB5 712 aa18.64■□□□□ 0.57
TTC28-204ENST00000468807 TMEFF2Q9UIK5 374 aaPredicted RBP18.64■□□□□ 0.57
TTC28-204ENST00000468807 A0A1W2PPL8 197 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 C5orf49A4QMS7 147 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 HTR3EA5X5Y0 456 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 C17orf100A8MU93 164 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 NME4O00746 187 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 MGRN1O60291 552 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 CDC14BO60729 498 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 CCDC22O60826 627 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 SERPINA1P01009 418 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 GUCA1AP43080 201 aaPredicted RBP18.63■□□□□ 0.57
TTC28-204ENST00000468807 NUDT2P50583 147 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 CCL8P80075 99 aa18.63■□□□□ 0.57
TTC28-204ENST00000468807 SPATA46Q5T0L3 261 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms